Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2833 ATGAGTGTTCCAACTGTGCTAGTTTTACCATTACCAGCTCAAGGACATGTCAACCCAATGATGATCTTCTCGCAAAGATTGGCTGAAAATGGTTGCAATATCATCTTTGTCAACACTGAATTCATCCATAAGAAAGTGCTGAGTTCCATGGGGAATCAAGAAGGCGGCGGTGTTAACGGAGAATGGCGGATAAAGTTGGTGTCAATGCCGGATGGGCTAGGACCTGATGCAGACAGAAATAATATCAGGGAACTATTTGATTCTATATTGAATAACATGCCTGCTATGCTTGAGAGGGTTATTGAAGATCTTAGATTGAAAGATGGTGTCACAGTAAGCTGCATAGTTGCTGATTTTGTTATGGCATGGGCGTTGGAAATTGCAAGAAAGATTGGAATCAGAGGAGTTCTGTTTAATCCTGCATCAGCAGCTATGTTAGCCTTGCAGTGCAGCATACCAAAGCTTATTGAGGATGGAATCATAGACTCTAATGGGTTGGCAACCACACAAAAAAGATTTCAGCTATCACCAAGCATTCCTCCCATGGACACAGAATCTATATGGTGGGGAAAAATATCTGATTCTAAAACTGAGAAGATGTTATTCAACATTATTCTTGAATCCATGAAAACTCTAGAATCCACAGAGTGGTGCCTTTGTAACTCCACACCCGATCTTGAACCTGGAGCATTATCATTCGTACCAAAGCTATTACCAATTGGTCCATTATTAAGAACCTATGGCCATGATCAAGGTGTAAGTGAAAGATCATTGGGACAATTCTGGGAAGAAGATTTTTCTTGTTTGAATTGGCTTGATCAACAACCTCATGGTTCTGTTATATATGTTGCATTCGGAAGTACCACTCTTTTTGATGAAAAACAATTCAAAGAACTCGCTCTCGGACTTGAACTTACTAATAGACCCTTTCTTTGGGTGTTGCGAAAAGATTCAGATTGTAACAATAAAGTGTGTTTTCCTAACGAATTCAAGGGGACTCAAGGTAAGATAATTGAATGGGCTCCTCAAGAAAAGGTGCTATCCCACCCTGCCATTGCTTGCTTTATAAGTCACTGCGGTTGGAATTCGACTTTGGAGGGTGTGTCTAATGGAGTGCCTTTTTTGTGTTGGCCATATTATGCTGACCAATTCTTTGACAAAATATATATTTGTGATGAGTGGAAGGTTGGATTGGGATTTGATTTGGATGAGAATGGGATGATCTCACGCGAAGAGATAAAAGTCAAAGTTGATAAATTGCTTAGTGATGAGAACATAAAATTTAAGGCTCGTGAGATAAAGAAGAAGCTAATGAAGGATGTTGATGTTGGAGGAAGGTCTTCAGAGAACTTAAATAAGTTCATCAACTGGTTGAAGGAATAA 1383 0.3955 MSVPTVLVLPLPAQGHVNPMMIFSQRLAENGCNIIFVNTEFIHKKVLSSMGNQEGGGVNGEWRIKLVSMPDGLGPDADRNNIRELFDSILNNMPAMLERVIEDLRLKDGVTVSCIVADFVMAWALEIARKIGIRGVLFNPASAAMLALQCSIPKLIEDGIIDSNGLATTQKRFQLSPSIPPMDTESIWWGKISDSKTEKMLFNIILESMKTLESTEWCLCNSTPDLEPGALSFVPKLLPIGPLLRTYGHDQGVSERSLGQFWEEDFSCLNWLDQQPHGSVIYVAFGSTTLFDEKQFKELALGLELTNRPFLWVLRKDSDCNNKVCFPNEFKGTQGKIIEWAPQEKVLSHPAIACFISHCGWNSTLEGVSNGVPFLCWPYYADQFFDKIYICDEWKVGLGFDLDENGMISREEIKVKVDKLLSDENIKFKAREIKKKLMKDVDVGGRSSENLNKFINWLKE* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2833 460 Gene3D Glycogen Phosphorylase B; 8 451 - -
Amo10g2833 460 PANTHER UDP-GLYCOSYLTRANSFERASE 83A1 3 460 - -
Amo10g2833 460 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 459 - -
Amo10g2833 460 CDD GT1_Gtf-like 6 455 IPR002213 GO:0008194
Amo10g2833 460 Gene3D Glycogen Phosphorylase B; 256 439 - -
Amo10g2833 460 PANTHER EG:EG0003.4 PROTEIN-RELATED 3 460 - -
Amo10g2833 460 ProSitePatterns EF-hand calcium-binding domain. 401 413 IPR018247 -
Amo10g2833 460 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 266 427 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2833 Amo-Chr10 93347686 93352327 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2833 1 459 Glycosyltransferase AT3G02100 45.572 4.10e-141 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2833 - - ahf:112716494 873.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g3423 20 143616523 143621885 Amo10g2833 10 93347686 93352327 hybridization