Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2673 ATGATAAAGTCTGAAAGGGACAAAACATTTTCCATTGACTTTATCCTTCTTTACTTCAATTTCTTAGTGATATTATATGTTGTATGTTTAGCTGCTTCTGGGTTTGTTAATGGATCTATCATCAAGAAGGAGAAAGACCAAATTAGGGTCTTTGAATTAAAGAAGGGTGACCTTACTTTGAAGGTCACCAACTGGGGTGCCACACTTATTTCCTTATTACTTCCTGACAAATACGGAAAGTTGGGAGACATTGTTCTTGGATATGACTCTCCCACGGCATACACTAATGATACACAATATTTTGGAGCTACCGTTGGCAGGGTCGCTAACAGAATCGGAGGAGCTCAGTTTACATTAAATGGAATCCATTACAAGTTAATTGCTAATGAAGGAAACAATACACTTCATGGCGGACCTAGAGGATTTAGTGATGTGCTTTGGAAAGTGGTAAAGTATCAAAGAGATGGTGACAGACCCAAAATCAAATTCAGCTACAACAGTTTTGATGGTGAAGAAGGATTTCCGGGTGACCTATTGGTAACAGTGAGCTACATCCTAAGTGAAGAAGGGAGTTTGAGCATAGTCATGAAAGCAAAAGCCTTAAACAAAGCAACACCAGTGAACCTCGTTAACCATGCATATTGGAACCTAGGAAACCACAACAGCGGCAACATCCTTAATCAAGTTGTTCAAATCTTCGGATCCAAATTCACACCGCTCAACGACCAGCTCATTCCCTTCGGAAACTTCTCGTCCGTAAAAGGAACCCCATATGATTTTCTTAAACCACAAGTTGTTGGCTCTAGGATTGACCAGTTATCCAAGACCAATGGCTATGACATAAATTATGTTCTTGACAATGACGAGGATGAGATTAGGGTTGCGGCTATTGTGACGGATAAGAGGTCAGGGAGAGTGATGAAGATTGCGACGAATCAACCGGGSTTGCAATTCTACACTGCGAATTATGTGAAGAATGAGAAGGGGAAAGACGGGTTTGTGTATCAGCCACGATCGGCGTTGTGTTTGGAGACTCAAGCGTTCCCTGACTCCGTCAACCATCCCAATTTTCCGTCAACTATTGTCACGCCGGAAAAGCCTTACAACCATCTTCTCTTCTTCAAATTCTCCACTACCCATGCTCCACATGGTTTTTAA 1158 0.4162 MIKSERDKTFSIDFILLYFNFLVILYVVCLAASGFVNGSIIKKEKDQIRVFELKKGDLTLKVTNWGATLISLLLPDKYGKLGDIVLGYDSPTAYTNDTQYFGATVGRVANRIGGAQFTLNGIHYKLIANEGNNTLHGGPRGFSDVLWKVVKYQRDGDRPKIKFSYNSFDGEEGFPGDLLVTVSYILSEEGSLSIVMKAKALNKATPVNLVNHAYWNLGNHNSGNILNQVVQIFGSKFTPLNDQLIPFGNFSSVKGTPYDFLKPQVVGSRIDQLSKTNGYDINYVLDNDEDEIRVAAIVTDKRSGRVMKIATNQPGLQFYTANYVKNEKGKDGFVYQPRSALCLETQAFPDSVNHPNFPSTIVTPEKPYNHLLFFKFSTTHAPHGF* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2673 385 PIRSF GALM 36 379 IPR015443 GO:0016853|GO:0019318
Amo10g2673 385 PANTHER ALDOSE 1-EPIMERASE 22 379 - -
Amo10g2673 385 PANTHER ALDOSE-1-EPIMERASE 22 379 - -
Amo10g2673 385 SUPERFAMILY Galactose mutarotase-like 43 377 IPR011013 GO:0003824|GO:0005975|GO:0030246
Amo10g2673 385 CDD galactose_mutarotase_like 54 376 - -
Amo10g2673 385 Pfam Aldose 1-epimerase 50 370 IPR008183 GO:0005975|GO:0016853
Amo10g2673 385 Gene3D - 39 379 IPR014718 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2673 Amo-Chr10 91008987 91014952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2673 44 377 Miscellaneous Gene Families AT5G15140 55.988 4.77e-135 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2673 K01785 - gmx:100779602 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g3306 20 141049934 141053709 Amo10g2673 10 91008987 91014952 hybridization