Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2273 ATGGCCTTGCTGAATCCATCTCTTCCCCACACCCAAGCCTTTCTTCCTCTCCGTCTTTCTGCTACACCATCCAAGCAAACTTCACTACTACTATGGACTACTCTCTCTTCCTATCCATTCAAACCATTATCAAGGAGGATGAAGCATGCAAGGTGTGAAGCTGTGGCAGACATCAAAGCTGATCCCTTGGTTGAAGGGGAAGGTGAAGAAGAAGAAGATCACAAGGTTCTTATGGGGCCTTCTTCAGAGGAAGAGAGAAGGGGTGAGAGGGTTGTTGCTGACTATGATTGGACTCAAGAGTGGTACCCTTTGTACCTCACCAACAATGTCCCTGATGATGCACCTCTTGGTCTCAGTGTCTTTGACAAGCAGCTCGTCTTGTTCAAGGACCCCAATGGCGTCTTCCACTGTTTCGAAGATCGTTGTCCACACAGGTTAGCAAAACTATCTGAAGGTCAGTTGATTGATGGAAAGCTTGAGTGTCTATACCATGGATGGCAGTTCGAAGGCGACGGAAAATGTGTTAAGATACCTCAGCTTCCAGCTGATGCCAAAATCCCAAGATCAGCTTGTCTTAAATCATATGAGGTGAAAGAATCCCAAGGAGTTGTTTGGGTATGGATGTCACCGAAGACACCTCCAAATGTCAATAAGTTACCTTGGTTTGAGAACTTTGCTAGACCAGGGTTTCAAGATGTTTCAACAATTCATGAACTCCCATATGATCATTCTATTCTCTTGGAAAACCTGATGGATCCTGCTCACATTCCAATCTCGCATGACAGAACAGACTGGACTGCGAAAAGAGAGGACGCACAGCCACTGCGTTTTGAGGTAACCGAGCGAACTGATAGAGGGTTTGCTGGTTGGTGGGGAAAAGAGCAAGAGGGCTCACTGCCGAACTTCTTACGGTTCGAGGCTCCTTGTGTGCTCCAAAACAACAGGGAAATAGTTGACAAAGATGGTCAGAAACACTACTTCACTGGCTTATTCCTCTGTAGACCAACAGGGCAAGGGAAATCCATGCTGATTGTGAGATTTGGAGGAACAAAAAGATCCCCATTAGCGAAATTGTTCCCTAAATGGTACTTCCATCAGAACGCTTGCAAGGTGTTTGAGCAGGACATGGGATTCCTATCATCCCAAAATGAAGTTCTATTGAAAGAGAAAGTTCCAACAAAGGAACTATATCTGAACCTAAAATCATCAGACACTTGGGTAGCCGAATACCGGAAGTGGATGGACAAAGTAGGGCATGGGATGCCGTATCATTTCGGTCACAGCACCATTTCGTTGCCCAAAGAGCCTGCTGTAGTTGAACATGCACCAGCAGGACTCATAGCAGGACAATCAGCATCAAATCCAGCAAAGGGTGGCACCGGAACAATGCATGCCCCGAACTTGGCCAATAGATACTTCAGGCATGTGATTCATTGCAAAGGTTGTAGCACGGTGGTCAAGGCTTTCGAAGCTTGGAAGAACGCCCTTTCGGCCGTAGCCATTGCATTCGCCGCATTGTCGATTCTGGTATCTGGGAGGCAGTGGAAAACCCTTCTTTTGGGATCCGCAGCACTGTGCAGTGCCGGAGCCTATGCATGCTCTTCAGCCATTGCATTGAATACAACAAACTTTATCAGGACACACAGGAGATTGTAA 1656 0.4668 MALLNPSLPHTQAFLPLRLSATPSKQTSLLLWTTLSSYPFKPLSRRMKHARCEAVADIKADPLVEGEGEEEEDHKVLMGPSSEEERRGERVVADYDWTQEWYPLYLTNNVPDDAPLGLSVFDKQLVLFKDPNGVFHCFEDRCPHRLAKLSEGQLIDGKLECLYHGWQFEGDGKCVKIPQLPADAKIPRSACLKSYEVKESQGVVWVWMSPKTPPNVNKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLRFEVTERTDRGFAGWWGKEQEGSLPNFLRFEAPCVLQNNREIVDKDGQKHYFTGLFLCRPTGQGKSMLIVRFGGTKRSPLAKLFPKWYFHQNACKVFEQDMGFLSSQNEVLLKEKVPTKELYLNLKSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKEPAVVEHAPAGLIAGQSASNPAKGGTGTMHAPNLANRYFRHVIHCKGCSTVVKAFEAWKNALSAVAIAFAALSILVSGRQWKTLLLGSAALCSAGAYACSSAIALNTTNFIRTHRRL* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2273 551 Gene3D - 228 419 - -
Amo10g2273 551 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 101 206 IPR017941 GO:0051537
Amo10g2273 551 Pfam Pheophorbide a oxygenase 305 390 IPR013626 GO:0010277
Amo10g2273 551 MobiDBLite consensus disorder prediction 65 85 - -
Amo10g2273 551 Pfam Rieske [2Fe-2S] domain 100 182 IPR017941 GO:0051537
Amo10g2273 551 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 51 551 - -
Amo10g2273 551 Gene3D - 96 225 IPR036922 GO:0051537
Amo10g2273 551 PANTHER PROTEIN TIC 55, CHLOROPLASTIC 51 551 - -
Amo10g2273 551 SUPERFAMILY Bet v1-like 201 420 - -
Amo10g2273 551 SUPERFAMILY ISP domain 94 215 IPR036922 GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2273 Amo-Chr10 79860196 79862206 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2273 - - gmx:100808233 912.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g2273 10 79860196 79862206 Amo20g2716 20 125076694 125078985 hybridization