Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2259 ATGGAGCAATTTTTCTCATATCACTATGCAATGATGATCAAACGCAGTATCATGATTGGTTTCTTCCACTTTGTGTTTTATATGTTTATATTGAGCAACCTTGCTCATTCATCGTCATCGTCCACTCCAAACTGTAAAGCATGGCTGGTCCAATCCATCCCYACAAATATGCCTCACCTCTTCCATGTCCCTGGTGTCCTCTCTACCGGGGATGTGCTAAGTTGGATGGCTGGAAACTCCACCAGGAGGCTTGACATAACTGCTCAGTACTGGGAGCTGCTTGCTTCTCCGGATGATCCTCGCTCCGGCGATTATGGTTACTCTWAGCAACAGATGCAAGAGTTTGGTGCTCAAGAAGGTGCTGCACTCTATCAAGCGCTGGAGGATGCTGCAGACCGCAATGTTAGCATCAGGTTACTGTCACATTCTGGAGTCTATCCAACATTTACCTTAGAGCCATCAAAACTTGCTGCCGGAAGGCCAAACGTCGAGAATGTGACCCTGCTTCTTAAGGATTGGTGGGGTTCAGGCATTGTCCATGCCAAAGTTTGGATATCTGATAGTAGAGATGTGTACATTGGATCTGCAAACAATGACTGGAAATCTCTTACACAGGTCAAGGAAGTAGGAATTTATTTTGCTGGTTGTCCAAGAATAGCTAACAAGGTTGAGATATATTTCGACAGTTTGTGGAAACTTGCATCTCTTAATTCTTCAGATTACACAAAAGCAGTGTTTGATCAAACGTGGCAAGTTGAAAGAAAGGTTCCCTGTTGGTCACATTTTATTGATCCTAAAGAGAGGTGCAAGTCGCCTCTCCCTCGTTATGCAGAGACACCTCGTGTTACAGGATATCCTATTCTGTCTGATCCTCACATATTTGAAGTTTCAATTCAAACATCTTGGAGTAACAATTCAACAATGCTACCCCAAGTCAGCTATCTCTCCTTTGCTCCTCCAGAGCTATTGTTCGGCAAGTATCAGGCTGATGAGCAAGCATGGATTGAAACAATTAAATCTGTTGGAGCGAAGGAGACAGTTAGAATCAGTACCATGGATTGGCTTGGTCAATCAGAATTTATGGACCCAACAATTTTCTGGCCATCATTATCCACAGCAATATCAGAGGTTGTKTTCTCCAAGCATGCAACAGTGAAGTTATTGGTGGCATATTGGGCACACAACATCAATAACACAGATCARTACCTGAARGCACTTCTCTACACCAACAATCTCTGCTCCTCTTTAMAGTACAATARTTGTTCTGGCAAAGTTGAGATCAAATATTATGTGGTTCCAGGTTTCAACATGACAGGGCCTGCAATTAAGGGTGGATCAAGAACAGGAAATATATACCCTGACTTTACAAGAGTGAATCATGGAAAATATGCAGTTAGTGATATAAGGGCTCACATAGGAACTAGCAATCTTGTGTGGGATTACTTTTATACTACAGCTGGTGTCAGCTTTGGGACATACAACACTGCCATTGTTTCTCAGCTCAARGAAATCTTTGATGCTGATTGGAACTCACCCTATGCTGTGCCTGTTCCAGTTCAACAACTGGAGAAAGGCCATACTCGATCAATCTAA 1593 0.4256 MEQFFSYHYAMMIKRSIMIGFFHFVFYMFILSNLAHSSSSSTPNCKAWLVQSIPTNMPHLFHVPGVLSTGDVLSWMAGNSTRRLDITAQYWELLASPDDPRSGDYGYSXQQMQEFGAQEGAALYQALEDAADRNVSIRLLSHSGVYPTFTLEPSKLAAGRPNVENVTLLLKDWWGSGIVHAKVWISDSRDVYIGSANNDWKSLTQVKEVGIYFAGCPRIANKVEIYFDSLWKLASLNSSDYTKAVFDQTWQVERKVPCWSHFIDPKERCKSPLPRYAETPRVTGYPILSDPHIFEVSIQTSWSNNSTMLPQVSYLSFAPPELLFGKYQADEQAWIETIKSVGAKETVRISTMDWLGQSEFMDPTIFWPSLSTAISEVVFSKHATVKLLVAYWAHNINNTDQYLKALLYTNNLCSSLXYNXCSGKVEIKYYVVPGFNMTGPAIKGGSRTGNIYPDFTRVNHGKYAVSDIRAHIGTSNLVWDYFYTTAGVSFGTYNTAIVSQLKEIFDADWNSPYAVPVPVQQLEKGHTRSI* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2259 530 SUPERFAMILY Phospholipase D/nuclease 313 517 - -
Amo10g2259 530 PANTHER GM01519P-RELATED 25 518 - -
Amo10g2259 530 CDD PLDc_vPLD3_4_5_like_1 49 216 - -
Amo10g2259 530 Gene3D Endonuclease Chain A 71 235 - -
Amo10g2259 530 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 175 202 IPR001736 GO:0003824
Amo10g2259 530 CDD PLDc_vPLD3_4_5_like_2 314 510 - -
Amo10g2259 530 PANTHER PHOSPHOLIPASE D - RELATED 25 518 - -
Amo10g2259 530 Pfam PLD-like domain 119 231 IPR025202 -
Amo10g2259 530 SUPERFAMILY Phospholipase D/nuclease 81 233 - -
Amo10g2259 530 Gene3D Endonuclease Chain A 317 512 - -
Amo10g2259 530 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 455 481 IPR001736 GO:0003824
Amo10g2259 530 SMART pld_4 175 202 IPR001736 GO:0003824
Amo10g2259 530 SMART pld_4 455 481 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2259 Amo-Chr10 79363677 79366374 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2259 K16860 - gmx:100778897 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g2259 10 79363677 79366374 Amo20g2702 20 124764342 124767470 hybridization