Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2094 ATGATGATGGCGTTCTCTCTCTGCCACACCTCTTCTTTCTTCATCGTTCACCGCTTACCACAACAAACTTTGATAAGAACAAGACGAATTCATTTCCCAATGATTCGTGCAGTGCAATCAGGGGAATCAGAAACTGAAAAGTCTACACAGAAAAAGACTGAAGAATCACCATCTTCAACTGCTGCTGCTTCTCCTCCTCCTAGACCAAAGAAACCCGTCTATTCTATGAAGAAGGGCCAGATTGTGAGAGTGGACAAAGAAAAATATCTCAACAGCATCAATTATCTTTCTGTTGGGCATCCGCCATACTACAAAGGATTGGATTACATCTATGAAGACCGTGGGGAGGTCCTGGATATGCGTATATTTGAAACAGGGGAGTATGCACTTGTAAGTGATCCTGTATCAAACTCATTCTTACCCTTGTTAGTTTGTTTACATGAAATACAGAAGAAAGAAAAGAATAGAGAAATTGCAATACACAACGGAACTGATGAGAACTCCTAG 507 0.4083 MMMAFSLCHTSSFFIVHRLPQQTLIRTRRIHFPMIRAVQSGESETEKSTQKKTEESPSSTAAASPPPRPKKPVYSMKKGQIVRVDKEKYLNSINYLSVGHPPYYKGLDYIYEDRGEVLDMRIFETGEYALVSDPVSNSFLPLLVCLHEIQKKEKNREIAIHNGTDENS* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2094 168 MobiDBLite consensus disorder prediction 36 77 - -
Amo10g2094 168 Pfam Cyanobacterial and plant NDH-1 subunit O 76 136 IPR020905 GO:0005886|GO:0016655
Amo10g2094 168 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT O, CHLOROPLASTIC 3 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2094 Amo-Chr10 74926159 74927437 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2094 - - gmx:100500669 158.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g2094 10 74926159 74927437 Amo20g2580 20 120735353 120736684 hybridization