Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1957 ATGGGTGCTGTATGTTATTATGTTGCTGCTGCTTTGCACTCGTTTATTGCTTGTTTCTCATTATTCATGCAAAGGGCAAGTAGTTCGCATCACGTGCACCGTAACCTTACCGATGGATTCACTCAAATTCCGTTGGACCACAAAGTCTTTGAAATTCAGAGGCCTTATGATGTACCGGAGAGTGCACGCACGTTACAGCTTTGTAAATGGAGTGCACAAGATGGCTATGATTATTCATCAGGAGTGTGGCAATTTGAAGCGCAGGGTTTTGTGCCACGCGACACTTCTGGGGTGTGCGTTATGCAAATTTTCGGAGCATCCCATCTTCGTGCCACCACTCTCATGATTAGAGCCTACAAAGGGTCTCTTTCATATTATAGGAGTCCAGTGCTGGCTCCAAACATATGGAACAGATGGTTTAAATTAAATGTGATACATGATGTTGATGCCTCTACCGTGAAGATTTACATCGATGGGATTTTTGTTCATGAGGCTGCAGGTCATGGTGGTGCCTCTCATGCCTTTAAGTGTGGGGTTTATTCACAGAATGATGCTTCCCATTATATGGAATCACGTTGGAAGGGAATCAAGAAGAAGAAGAACATCACAACAAACATCTTCAAGGAGAAAGTCATGGCTGTGATGATGTTGATGATAATGGGTTCTGAAAATGGCACTAAGAGCGGTGGAGTCGTGGAGCAAACTTTTTCTCCATGA 717 0.4365 MGAVCYYVAAALHSFIACFSLFMQRASSSHHVHRNLTDGFTQIPLDHKVFEIQRPYDVPESARTLQLCKWSAQDGYDYSSGVWQFEAQGFVPRDTSGVCVMQIFGASHLRATTLMIRAYKGSLSYYRSPVLAPNIWNRWFKLNVIHDVDASTVKIYIDGIFVHEAAGHGGASHAFKCGVYSQNDASHYMESRWKGIKKKKNITTNIFKEKVMAVMMLMIMGSENGTKSGGVVEQTFSP* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1957 238 Pfam Alginate lyase 69 197 IPR014895 -
Amo10g1957 238 PANTHER BINDING PROTEIN, PUTATIVE, EXPRESSED-RELATED 74 200 - -
Amo10g1957 238 PANTHER CITRATE-BINDING PROTEIN-LIKE 18 63 - -
Amo10g1957 238 SUPERFAMILY Concanavalin A-like lectins/glucanases 46 187 IPR013320 -
Amo10g1957 238 PANTHER BINDING PROTEIN, PUTATIVE, EXPRESSED-RELATED 18 63 - -
Amo10g1957 238 PANTHER CITRATE-BINDING PROTEIN-LIKE 74 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1957 Amo-Chr10 70470770 70472496 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1957 - - zju:107425510 205.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g1957 10 70470770 70472496 Amo20g2478 20 116006598 116008086 hybridization