Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1925 ATGGGGACTGTAAGTGAAATTCGTGGTCTAATCATACTTATTTGTTTCTCATTGATCATGGATAGGACAGGAACCTCTGCGGTGAACTACCTAACTCTGGGTTTCACTGAACTTCCACTTAACAGCTCCAATCTTCATAACCACAAGCCTTATAATCTACCCGGGTACGACTATTCCCATGGGGTCTGGCAATTTGAAGGGTATGGGTTTGTGCCGTATGGCACATCGGGAGTGTGCATCATGCAAGTTTTTGGGGCACATCCGAAGAGAGCCACCACTCTTATGTTGAGAATGATTGACGGTTGGCTTGCATATTATGGGGGTCCATTCCTGGTTCCAAACATGTGGGAGAGATGGTTCCGTTTGAATGTGATCCATGATGTGGAGGCCTCCATCGTGAAGGTTTATGTTGATGGTGTTCAAGTTTTCCAAGCACCTGGTCATGGTGGTTCCTTCCACTACTTCAAATTTGGGCTTTATGCACAACCTAATGCTTCCTACTACATGGAATCCCGCTGGAAAGGAATTAGAGTTCTCAAGAAAGATTATTACTAA 555 0.4468 MGTVSEIRGLIILICFSLIMDRTGTSAVNYLTLGFTELPLNSSNLHNHKPYNLPGYDYSHGVWQFEGYGFVPYGTSGVCIMQVFGAHPKRATTLMLRMIDGWLAYYGGPFLVPNMWERWFRLNVIHDVEASIVKVYVDGVQVFQAPGHGGSFHYFKFGLYAQPNASYYMESRWKGIRVLKKDYY* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1925 184 PANTHER BINDING PROTEIN, PUTATIVE, EXPRESSED-RELATED 54 182 - -
Amo10g1925 184 SUPERFAMILY Concanavalin A-like lectins/glucanases 56 168 IPR013320 -
Amo10g1925 184 PANTHER CITRATE-BINDING PROTEIN-LIKE 54 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1925 Amo-Chr10 69801263 69804127 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1925 - - ahf:112786159 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g1925 10 69801263 69804127 Amo17g2616 17 125490523 125492434 hybridization