Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1118 ATGGCTGATAGTTTGGTCAGATCCGGAGCGAAACCCAAGACCTGCCACATCGACGCTGCCATGGAATGCGTCGTTCGCTACATCGACGACCCCAAAGACCGCAGCGCCGTCTCCCTTGTCTGTCGTCGATGGCACCAGCTCGATTCTCTTACACGCAAGCACGTCACCGTCGCCTTCTGCTACACCACCACTCCGGAGCGCCTTAGGCGGCGGTTCCCACGGCTGGAGTCCCTGAAGCTGAAGGGGAAGCCGAGGGCGGCGATGTTCAACCTCATACCGGAGGATTGGGGTGGTCACGTGACACCTTGGGTGAGGGAAATCTCGGAGGGTTTCGAGTTTCTGAAGAGCGTTCATTTCCGGCGAATGATTGTTAGGGATTCGGATCTTGAGCTTCTTGCGAGGTCACGTGGTCACGTGCTTGAGGCTTTGAAGCTTGATAAGTGTTCTGGTTTCTCCACTGATGGCCTTCTCTTTGTTACTAGGTTTTGCAGGAATTTAAGAGTCTTGTTTTTGGAGGAAAGCACAATTGTTGAGAAAGATTGTGAATGGCTGCATGAGCTTGCTTTGAACAATACTGTACTTGAGACGCTGAATTTTTACTTGACAGACATTGCTGCTGTCAAATTTCAGGACCTGGAACTTATAGCCAAAAATTGTCCTAACTTAGTCTCTGTGAAAATTACTGATTCTGAAGTCTTGGATCTTGTGAACTTCTTTTGCTATGCCTCTGCTCTAGAAGAATTTAGTGGAGGTTCCTACAACTGCGAACCGGATAAGTACAATGCTGTTGTGTTACCAGAAAAATTACATCGATTGGGTTTGACATATATCGGAGGGAATGAGTTGCCGGTGGTGTTCAGGTGTGCATCTGGGCTTACAAAATTGGATCTGCTTTATTCATTTTTGGATTCAGAGGATCATTGTATGTTAATCGAGAGGTGCCCCAATTTGGAGGTCCTTGAGTCGAGGAATGTGATTGGAGATAGAGGATTGGAAGTTCTTGCTCGCTGTTGTAAGAGGTTTAAAAGGCTTAGGATTGAACGAGACAGTGATGAAGTTGGTACTAGTGTTACCCATAAAGGATTAATTGCTTTGTCACAGGGATGTCCAGAACTAGAATATTTGGCTGTTTATGTATCTGACATGACAAATGCCTGTCTCGAACACATTGGTACTCACTCCAAAAATCTCTATGATTTTCGGCTTGTCTTGCTTGATCACCGTGAAAAAATAACTGATTTGCCACTTGACAATGGAGTAAGGGCTTTACTCATGGGTTGCGACAAGCTTATAAGATTTGCACTATATCTGCGTCCCGGGGGCTTGACCGACAAGGGTCTTGGCTATATTGGGAAATACAGCCAAAATGTTAGGTGGATGCTGCTTGGTTACCTTGGGGAGTCTGATGCAGGGCTTTTGGAATTCTCTAAGGGATGTCCTAATCTTCAGAAACTTGAAATGAGAGGTTGTTATCATTTCAGTGAGCGTGCACTAGCTGCTGCTGCGACGCAACTGGCTTCGCTTAGGTACTTGTGGGTGCAAGGATGTGGGCAATCTACTTCCAGAGGTGATCTTGTGGCTATGGCTCGCCCCTTTTGGAATATTGAGTTGATTCCTTCGAGGCGTGTGATCGCCAATGATGAATCTCGAGGCCCTGTAGCTGTTGAGCATCCGGCACACATTCTTGCATATTACTCTCTTGCAGGACAGAGATCTGATTTTCCAGATTCTGTTGTACCTCTGGATTCTACCACACGTGTATAA 1764 0.4654 MADSLVRSGAKPKTCHIDAAMECVVRYIDDPKDRSAVSLVCRRWHQLDSLTRKHVTVAFCYTTTPERLRRRFPRLESLKLKGKPRAAMFNLIPEDWGGHVTPWVREISEGFEFLKSVHFRRMIVRDSDLELLARSRGHVLEALKLDKCSGFSTDGLLFVTRFCRNLRVLFLEESTIVEKDCEWLHELALNNTVLETLNFYLTDIAAVKFQDLELIAKNCPNLVSVKITDSEVLDLVNFFCYASALEEFSGGSYNCEPDKYNAVVLPEKLHRLGLTYIGGNELPVVFRCASGLTKLDLLYSFLDSEDHCMLIERCPNLEVLESRNVIGDRGLEVLARCCKRFKRLRIERDSDEVGTSVTHKGLIALSQGCPELEYLAVYVSDMTNACLEHIGTHSKNLYDFRLVLLDHREKITDLPLDNGVRALLMGCDKLIRFALYLRPGGLTDKGLGYIGKYSQNVRWMLLGYLGESDAGLLEFSKGCPNLQKLEMRGCYHFSERALAAAATQLASLRYLWVQGCGQSTSRGDLVAMARPFWNIELIPSRRVIANDESRGPVAVEHPAHILAYYSLAGQRSDFPDSVVPLDSTTRV* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1118 587 Gene3D - 6 52 - -
Amo10g1118 587 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 16 583 - -
Amo10g1118 587 PANTHER CORONATINE-INSENSITIVE PROTEIN 1 16 583 - -
Amo10g1118 587 Gene3D Ribonuclease Inhibitor 53 585 IPR032675 -
Amo10g1118 587 Pfam F-box 17 54 IPR041567 -
Amo10g1118 587 Pfam Transport inhibitor response 1 protein domain 73 119 IPR041101 -
Amo10g1118 587 SUPERFAMILY RNI-like 355 521 - -
Amo10g1118 587 SUPERFAMILY RNI-like 91 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1118 Amo-Chr10 23465213 23468949 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1118 K13463 - gmx:732662 909.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1601 20 44374983 44379277 Amo10g1118 10 23465213 23468949 hybridization