Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1089 ATGGTTGATTTGCATTGGAAAACAAACATGGTCAACTCCGACATGTCATCAAATCCTCCAAAACTTTCGAACCCCTCACAGTCACCGCGCGGTCCCTCTCTGCATGTTCCCTTCCCCACCACAACAGACTTCTCCCCCGCACCTCCTCCGCTCTGTGCCGCCTACGACCACTACCTCCGCCTCCCGGACCTCCGAAAACTGTGGTCCCACAGAGACTTCCCAACCTGGAACAACGAGCCAATCCTAAAACCCGCTTTGCAAGCTCTTGAAATCTCGTTCCGGTTCCTCTCCACTGTGTCATCGGATCCAAGACCTTACGCGAACCGAAGAGAATGGAACCGTAAGATTGAGTCACTCGCCACGTGTCAGATCGAGATCATATCTATTCTCTGCGAGGACGAAGAGCAAGACACGGAAACACGTGGCACTGCACCAACCGCTAATCTCGCAGAATCCGGTAACAGAATTAGTTACAGCGAGTCCAGCCTGCTTCCGAGACTCGCCACGTGGCGGAGATCGAAGGACGCAGCTCAGAGGATCCTCCTCACCGTGGAGTGCCAGATGACAAGGTGTCCGTACACTTTGGGCCTAGGTGAGCCCAATCTCTCGGGAAAGCCCAGTCTCCTTTACGATGCGGTTTGCAGGCCCAGAGAACTCCACACGCTCCAGGCGACGCCGTTGGAGGGGAACTACGAGAACGTGAACGTTCATGCGGCGCACCAGATCTTGGAATCGTGGATCCGCGTAATGCAGAAGCTTCTAGAACGAATCGCTGGATCAATCGAAGGGAGGAAGTTCGAGAAGGCCGCGAGTGATCTCGACGCGGTGGAGCGGATCTGGAAGCTTCTGGAAGAAGTTATGGATGTTCACATGGCAATGGATCCTAACGATTTCTTGAAACTGATGAAGAGCCAGCTGGCAATGAGGTCGTTGAAAAACGGTTGCATAGGCGAAACGGTGCCGTTTTGTTTCCGGTCGAGGGAGTTGGTTGAGGTGGCGAGGATGTGTAAGGAGCTGAGGGAGAAGGTGCCGGAAGTAGTGGGAGCGGAGGTGGATCCAACGGGAGGGCCGAGGATTCAGGAGGCAGCGATGAGGCTTTACGCGGCGGCGGCGGAGGAGGAGAGGGAGAAGGTGGAGGTGCTGCAAGGGATGCAGGCGGTGGAGAAGGCTATGAAGGGGTTCTTTTATGGATACAAGCAGATGGTGGCGGCGGTTATGGGGAACGTGGAGGCGACTGGGAACCGAGTTGGGATGGGTTGCGAGGGTGGTGACTCACTGACTCAGATATTTATGGAGCCTACTTATTTTCCAAGCTTGGACGCTGCCAAAACTTTCTTAGGGTACTTTTGGGATAACAATACTAACAACAATAATAACGATCATGGTAAACGTGTTAATAGTTTTGTTGCTGATAGAAGGATTCGATGTTAG 1431 0.5346 MVDLHWKTNMVNSDMSSNPPKLSNPSQSPRGPSLHVPFPTTTDFSPAPPPLCAAYDHYLRLPDLRKLWSHRDFPTWNNEPILKPALQALEISFRFLSTVSSDPRPYANRREWNRKIESLATCQIEIISILCEDEEQDTETRGTAPTANLAESGNRISYSESSLLPRLATWRRSKDAAQRILLTVECQMTRCPYTLGLGEPNLSGKPSLLYDAVCRPRELHTLQATPLEGNYENVNVHAAHQILESWIRVMQKLLERIAGSIEGRKFEKAASDLDAVERIWKLLEEVMDVHMAMDPNDFLKLMKSQLAMRSLKNGCIGETVPFCFRSRELVEVARMCKELREKVPEVVGAEVDPTGGPRIQEAAMRLYAAAAEEEREKVEVLQGMQAVEKAMKGFFYGYKQMVAAVMGNVEATGNRVGMGCEGGDSLTQIFMEPTYFPSLDAAKTFLGYFWDNNTNNNNNDHGKRVNSFVADRRIRC* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1089 476 Pfam Hs1pro-1 protein C-terminus 188 452 IPR009743 -
Amo10g1089 476 MobiDBLite consensus disorder prediction 9 38 - -
Amo10g1089 476 MobiDBLite consensus disorder prediction 1 38 - -
Amo10g1089 476 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 460 IPR038759 -
Amo10g1089 476 Pfam Hs1pro-1 N-terminus 1 185 IPR009869 GO:0006952
Amo10g1089 476 Gene3D - 208 310 - -
Amo10g1089 476 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 210 446 IPR037217 GO:0019441|GO:0020037|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1089 Amo-Chr10 22052932 22054777 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1089 - - gsj:114396435 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1568 20 40815908 40817735 Amo10g1089 10 22052932 22054777 hybridization