Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0701 ATGGGAAAGAAGCAATCTTTGCGTAGCAAAGCTACCCAGATTGTATCTGTTATCCTGAATCCAATATCTGACTCTGACACTCTCAAACACCCTCCTCCAACACCTTCTGATGAGGTAGGGGGATTAGGAGGAACAACAAGTGAATCAGAGAAAACTGAAGAGCGTAGCAATGATTTAGTTGATGGCCCTGATACCTCATCTTTCAGTGCATTTCTATATTCTTTCTTGTCTTCATCAGATGCTGGAGGAGATAATGCAAAGGTYCATGGACAGAGTGATGGTAAAGGTGCTTCAGGTGATGYTAATAACRCTTTACCCGATTCATCYTTGAAGGAGAATAATGGTGGAAAGAAAAGCTTGTTCTCTAGGAGTAAGCAATCACTTGGTAGAGTTATTCGCCAAGCCGCTAGGATCGGTGGATTTCGCCATCAGGGGCGYAAGGATAATAATTCRGAAATGAATTCTGATTGTCTAAATGGTTCTGGATTGAATGGTGTTGAGATGAATCATCTTTCAACTGTGAAAGGGAAAGAATCAGAGTCTGTGTCTTTGGTTGACATGCCAGAAATTTCTGAGCCGTCGATGCTCCTTTCGGACGCGATGAGAAGTACTCTCTATGCTTCTCTTCCTGCTCTTGTTCATGGAAGGAAGTGGCTGTTGCTGTACAGCACTTGGAGGAACGGTATATCACTTTCAACCCTTTATCGAAGAAGCATGCTTTGGCCTGGATTGAGTTTGCTGGTTGTCGGAGACCGAAGAGGAGCTGTGTTTGGAAGCTTAGTTGAAGCACCTCTTAGACCATCCAACAAGAAATACCAGGGAACAAACAGTACATTTGTTTTCACAAGTATTTCTGGCCATCCTGTTATATATCGTCCAACAGGGTTAAACCGCTATTTCACACTATGCAACACTGAGTTCTTAGCAATTGGAGGAGGAAGTCATTTTGCGCTTTATTTGGATGGTGATCTATTGAATGGCTCAAGCTCGGTCTCGGAAACCTACGGAAATCCTTGCCTTGCGAATTCTCAAGATTTCGAAGTGAAGGAAGTAGAGTTATGGGGCTTTGTGTATGCTTCAAAATATGATGAAGTACTTGCATTTAGCAGAACAGAGGCACCTGGCATCTGTCGATGGTAA 1140 0.4289 MGKKQSLRSKATQIVSVILNPISDSDTLKHPPPTPSDEVGGLGGTTSESEKTEERSNDLVDGPDTSSFSAFLYSFLSSSDAGGDNAKVHGQSDGKGASGDXNNXLPDSSLKENNGGKKSLFSRSKQSLGRVIRQAARIGGFRHQGRKDNNSEMNSDCLNGSGLNGVEMNHLSTVKGKESESVSLVDMPEISEPSMLLSDAMRSTLYASLPALVHGRKWLLLYSTWRNGISLSTLYRRSMLWPGLSLLVVGDRRGAVFGSLVEAPLRPSNKKYQGTNSTFVFTSISGHPVIYRPTGLNRYFTLCNTEFLAIGGGSHFALYLDGDLLNGSSSVSETYGNPCLANSQDFEVKEVELWGFVYASKYDEVLAFSRTEAPGICRW* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0701 379 SMART 109ultra 194 357 IPR006571 -
Amo10g0701 379 MobiDBLite consensus disorder prediction 1 67 - -
Amo10g0701 379 PANTHER TLD-DOMAIN NUCLEOLAR PROTEIN 1 373 - -
Amo10g0701 379 MobiDBLite consensus disorder prediction 82 124 - -
Amo10g0701 379 MobiDBLite consensus disorder prediction 1 30 - -
Amo10g0701 379 MobiDBLite consensus disorder prediction 96 124 - -
Amo10g0701 379 ProSiteProfiles TLDc domain profile. 195 357 IPR006571 -
Amo10g0701 379 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 1 373 - -
Amo10g0701 379 Pfam TLD 220 356 IPR006571 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0701 Amo-Chr10 8938617 8942062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0701 217 360 EF-hand Containing Proteins AT5G06260 30.519 1.39e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0701 - - aip:107622578 726.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1140 20 21776753 21779772 Amo10g0701 10 8938617 8942062 hybridization