Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0603 ATGGATTTCCATAAAAGGCACTCGGTTTCCCTGCTTTCAACTTCTAACATGCTAGATGATATTCTCATAAAGAAGCTTCTCCTCACACACGATCCAGATGGTCGTTGGTTGGATTCTGAGACTATGCTGCAGGCTGTTGGAAGTGTTATGTTTCATGCTTCAACAATAGTGGCTTCTAATTTATCCTCTGCCTTCTTTCCAATTCTGAAGAACGACATAACCGAAATTGAACAGCTTGATTGTCCTGAACCATTAGGATGCATCATCAGCAAAATTTCATACAAGATTTTCTGCAACTGTAAATGCTCCGCGGACGGCGATCTCAATTCAAGGATATTGAGTTTGTTTGATTTGATTAAGGATTATAGATGGGATGCGAAAGTAGTTCTAGTCCTAGCTGCTTTCGCTGCAAGATATGGCGAATTCTGGCAACTCATACAGCTTCGGCCACAGAACACTTTGGCCGATTCAATAGCGAGGATTAAGCAACTACCCTTCAATTTAAGGCCACTGCGGCCACAAATCAAGGCATTGAGCTTGTTGGTTAAGACAATGATGGATGTGGCAATGTGCATTATTGAGTTTGAATCTTTTCTACCACATCAGCATTTAGAGCTTGGAAATGAGAAAGTAACTGCCACAAAGTCTCTGGTGTATGTTGCTGTTTACTGGATCATTAGAAGCAGCTTTGCATGCTTTTGTCAACTCATGGATCTCAGAACCAAGAACAAACATGACCAAGTGTTAGGAAGTATATGCAACATTCTCAGAGCACAGGTGGATTTGTGTCACCAAGAAATAGAGAGAAACGTACAAGACAAGCTATTGAATCTTGCTGATGAGGTTCACATTGATAATCAGAAGGTTCTCAATTTATTGTTTCCTTCAAAGAATTACTTGCCATTGAAGGATTGCTCAAAAAAAGTGAAGCTTGGTGTGACTAAACTGAAAWATAAGATAGTTCTTCTTTTAATCTCAAAGYCGAAGCTACTTGCGYTYGAAGAATTACTCTTACTAGTTCAGCAAACATGTGATCATCCTTTGAATGAGAGATTCAAGGACAGTTATGAGATTGTGTGGATTCCATTTCCATCTTCTGGTACATCATGGACTGATGCTGAACAGAGTAGTTTCGAATTCTTATCGAATTCTCTGCCTTGGTATGCTGTTTGGAAGCCAAGGCTACTAAGCTCAGCTGTCGTGAAGTACATCAAAGACAAATGGAACTACAGAGATGATCCTGTAATCGTCACACTCGATTCGAATGGAACGGTTGCAAATTGCAATGCTCTTGATATGATCATGATTTGGGGCGTTCGAGCTTATCCGTTTTCAGCTTCAAAAGAGGCAGAGCTCTGGGAAGACCAGAATCTCACAATGCAACTTTTGCTAGGTGATATCAACCCTCTTCTTGCATATTGGGTTGAAAAAGGCAAAAACATTTGCATTTATGGGAGTGAAAACCTGCCATGGATCCAACAATTCAGTGACTGCATAACCAAGCTCAAACAACAAGGYCTGCAGCTAGAAACAATATATGTTGGTYATAGTAACYTCACTGAACAAATAAAAAATATAATGTCAAGTTCTACTGAGATTAATGAGAGTAGCCAACTTTCCTTTACAAARATGCAACTCTTCTGGATTCGGTTGGCGAGTATGAGAAGATCGAAAATCAGACTAGGAAAGACACCAAGTTCTGATCAAGTTTTGGCAGAGTTATCAGCAATGCTTGACATGAATGATAAAAAGGAAGGTTGGGCAGTGATTGGAAGTTGTTGTAAAGAAGATAATATTATAAGGCTTCAAGGAATGGTTTTGATGGATTTTTTAGGGAGATTTGAWGAGTGGRGTGAAGATCTAGAAAGGTTTGGTTTGGTTGGTACTGCAAGAAAGTTCTTAGACCCTAACTTTGTTGTTGAAGGTCCTTGCAATCACTCTTACATGGTTTCATCAAGTGAAGGTTCAACTCAAGGGAGTGTTGTAACTTGTCCAGTGTGCAACTGTCCTATGAAGAAGTTTGTGGTGTATCAACCATGA 2040 0.3961 MDFHKRHSVSLLSTSNMLDDILIKKLLLTHDPDGRWLDSETMLQAVGSVMFHASTIVASNLSSAFFPILKNDITEIEQLDCPEPLGCIISKISYKIFCNCKCSADGDLNSRILSLFDLIKDYRWDAKVVLVLAAFAARYGEFWQLIQLRPQNTLADSIARIKQLPFNLRPLRPQIKALSLLVKTMMDVAMCIIEFESFLPHQHLELGNEKVTATKSLVYVAVYWIIRSSFACFCQLMDLRTKNKHDQVLGSICNILRAQVDLCHQEIERNVQDKLLNLADEVHIDNQKVLNLLFPSKNYLPLKDCSKKVKLGVTKLKXKIVLLLISKXKLLAXEELLLLVQQTCDHPLNERFKDSYEIVWIPFPSSGTSWTDAEQSSFEFLSNSLPWYAVWKPRLLSSAVVKYIKDKWNYRDDPVIVTLDSNGTVANCNALDMIMIWGVRAYPFSASKEAELWEDQNLTMQLLLGDINPLLAYWVEKGKNICIYGSENLPWIQQFSDCITKLKQQGLQLETIYVGXSNXTEQIKNIMSSSTEINESSQLSFTKMQLFWIRLASMRRSKIRLGKTPSSDQVLAELSAMLDMNDKKEGWAVIGSCCKEDNIIRLQGMVLMDFLGRFXEWXEDLERFGLVGTARKFLDPNFVVEGPCNHSYMVSSSEGSTQGSVVTCPVCNCPMKKFVVYQP* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0603 679 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION C 1 678 - -
Amo10g0603 679 Pfam Sieve element occlusion N-terminus 19 281 IPR027942 -
Amo10g0603 679 Pfam Sieve element occlusion C-terminus 447 678 IPR027944 -
Amo10g0603 679 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 1 678 IPR039299 GO:0010088
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0603 Amo-Chr10 6840607 6844697 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0603 - - gmx:100819823 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g5120 13 150775796 150781586 Amo10g0603 10 6840607 6844697 PCT