Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0591 ATGTCTTCTCCCGGCCACGGCGCCTCCTCCGCCGTGCAGGTGGAGGAGCAATTCCTATCCGCTGGTCGGAGCTCCGAGAAGCTGAGCCTTTCAACACTCCAATCGAAGATGAAGTGTGACCCGGAAGGCTACGTATTGGAGCTCCTTCGACTCTGCGACCAGTTCAATTCCTCCCTCGTGCTCTTCGAGCAACAAGCCGCCATGAACTTCGCCTCCATCACCGGCATCGGTGGCGACCCCACCGTTGCCAAAGACCTCGGCGATAAGGCAATGTTCCTCGCACAGGTCACCCCTTTCTACCCCAAACACCTCAAAGATTTCCCCCAAAAACTCGCCAGTTTGATCCGTTGCGCCTCCCGCAATCTCCCGTCGGGGCTCCGCTGCCGCCTCGCCCAAGCTCTAATTCTCCTCATTAATCGGAAGATTGTTGATATTGGCGAAACTCTGTCGTTGTTCATGGAGCTTCAAACCTTAGGTGACAGGACGTTGAAGAAGCTGGCATTTGATAACGTCATTCACAGTATTAAGCGCATGAACCAGAAGCATAAGAACGAAGCGAAAAACCGGGCTCTGCAAAATGTCTTGTTTTCAATGCTGCAGGAAGAGGATGAAGTGCGAGCTAAGAGAGCGCTCGTGACACTGTGTGAACTTCACAGAAGAAAAGACTGGTTTGACGAGAGAACAGCTAATGCAATTTGCAGTGCTTGTTTCCATCCAGCACCAAGGATCATGAAAGCGGCTTTATCGTTTCTACTAGATTATGAGAAGATTGAAAATGATTCAGACAGTGACAATTCAGACAGTGAAGATGAAACCAAGGAGTCTACTCAAGTCATCCTTAGTAAGGAGACAATTTATAAGGCACACCACCAAGGAACAGCAGCTAGCAAAAAGAAAAAGAAAGCCAAACTAGAACGTGCCATGCGCAGCATCAAAAGGAAGCAACGTTTGTCAACTGAGAGGAACAATAACAGTTATTATTCACCACTTAACCATCTGAAAGATGCACAGGGTTTCGCTGAGAAGCTGTTGTCACGTTTACACAAATGTAATGAAACATTTCAGGTTAAGCTGATGTTGATAAAATTGATTGCTCGAACTGTTGGGCTTCACCGGTTAATTTTGTTAGACTTCTATCGATTTCTTCAGAAATATATTCAGCCACGTCAACAAGATATTACAAATTTGCTTGCTGCAGTGGTTCAGGCTTGCCATGACATGGTTCCTCCTAATGAAGTTGAGCCCTTGTTCTATCAAATAGTAAATGAGTTTATACATGATCGCTCTCGTCCTGAGGCTATGACTGTTGGACTAAATGCAGTCCGGGAAATATGTATGCGGATGCCATTGTTAATGAATGAAGACTTATTACGAGACCTTGCTCTGCATAAGAAATCACATGAGAAGGGAGTTTCAATAGCAGCTCGATCTCTGATTGGCTTATTCAGGGAGGTTAACCCTTTATTGTTAGTTAAGAAGGATCGTGGCCGGCCTATGGACGCCAAGGCAAGACCAAAATCATATGGAGAAGTTAGTGCTGCAACTGATGTTCCCGGTGCTGAATTCTTGTCTATTGTACACAATGATGATGATCAGGAGGGTAGTGATTCCGATGATTCTGTAGGCAGTGGCTTTGACAATGACCAGGAAAATGATCTGATGACTACCAATGATGATGATGAGATAAGTTCTGATACCAAGACTGGTGAGAGTGATGAGGATGATGATCTTGAAGATATGGAGAATGACCTTGAAGACAGTGAACAGGATGACGAAGAGGATGGTGAGGTTTCCGAACAGGAAGATGATGATGTGCATACTTCTTGTGATGATGAAAGTGTAGGTGCAAATAGTAGAAAGAAAGACTCAGCAAAGAAAAGAAAGATTGCTGATTTTGATGATCAGCTTTTAGCTGCTGATACAAGTCTCCGGGCTTTGAAGAAATTGGCAGGCACAACAATGGGGCATGCACCCCTTCCAGAATCTACAGATGGTATTCTATCCAATGAGGACTTCAAGAGGATCAAGGAACTAAAGGAAAAACATGAAGCAAGAAACACATTTGCTCAGCATGGGCTAGCACGTTCGGCAACAATTAAGGTTCCAGATTCTGATAGACTAAGTTTGAAGCGAGTAGATGGCGCGACGCTTGAAGTTCATGTAAAGAAAAGGCAAAGCAAGGAAGAAAAGTTGGCATTGGTTAAAGCAGGAAGAGAGGATAGAGGAACATACCATTCTAAAACAGCTGTAAAGCAGAAAAAGACGGGTGGACTAAGCAACCGTCAGAAGGAACACAAGAAGAAAATGCCAATGGCTGCAAAGAGAAGCAAGATCGCAAAATCTCGCGTAGAGAAGAAGAAAATGAATCAGCGAGCAGGGAAACAGTTCCGAGGAAGGAAAGCATGGAAATGA 2412 0.4486 MSSPGHGASSAVQVEEQFLSAGRSSEKLSLSTLQSKMKCDPEGYVLELLRLCDQFNSSLVLFEQQAAMNFASITGIGGDPTVAKDLGDKAMFLAQVTPFYPKHLKDFPQKLASLIRCASRNLPSGLRCRLAQALILLINRKIVDIGETLSLFMELQTLGDRTLKKLAFDNVIHSIKRMNQKHKNEAKNRALQNVLFSMLQEEDEVRAKRALVTLCELHRRKDWFDERTANAICSACFHPAPRIMKAALSFLLDYEKIENDSDSDNSDSEDETKESTQVILSKETIYKAHHQGTAASKKKKKAKLERAMRSIKRKQRLSTERNNNSYYSPLNHLKDAQGFAEKLLSRLHKCNETFQVKLMLIKLIARTVGLHRLILLDFYRFLQKYIQPRQQDITNLLAAVVQACHDMVPPNEVEPLFYQIVNEFIHDRSRPEAMTVGLNAVREICMRMPLLMNEDLLRDLALHKKSHEKGVSIAARSLIGLFREVNPLLLVKKDRGRPMDAKARPKSYGEVSAATDVPGAEFLSIVHNDDDQEGSDSDDSVGSGFDNDQENDLMTTNDDDEISSDTKTGESDEDDDLEDMENDLEDSEQDDEEDGEVSEQEDDDVHTSCDDESVGANSRKKDSAKKRKIADFDDQLLAADTSLRALKKLAGTTMGHAPLPESTDGILSNEDFKRIKELKEKHEARNTFAQHGLARSATIKVPDSDRLSLKRVDGATLEVHVKKRQSKEEKLALVKAGREDRGTYHSKTAVKQKKTGGLSNRQKEHKKKMPMAAKRSKIAKSRVEKKKMNQRAGKQFRGRKAWK* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0591 803 MobiDBLite consensus disorder prediction 725 747 - -
Amo10g0591 803 MobiDBLite consensus disorder prediction 552 608 - -
Amo10g0591 803 SUPERFAMILY ARM repeat 103 488 IPR016024 -
Amo10g0591 803 MobiDBLite consensus disorder prediction 528 629 - -
Amo10g0591 803 MobiDBLite consensus disorder prediction 725 803 - -
Amo10g0591 803 PANTHER PROTEIN SDA1 HOMOLOG 25 803 - -
Amo10g0591 803 Coils Coil 570 590 - -
Amo10g0591 803 Pfam NUC130/3NT domain 92 143 IPR012977 -
Amo10g0591 803 Coils Coil 294 317 - -
Amo10g0591 803 MobiDBLite consensus disorder prediction 767 782 - -
Amo10g0591 803 Pfam SDA1 452 800 IPR007949 -
Amo10g0591 803 MobiDBLite consensus disorder prediction 609 629 - -
Amo10g0591 803 PANTHER HSDA/SDA1-RELATED 25 803 IPR027312 GO:0000055|GO:0042273
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0591 Amo-Chr10 6721300 6727664 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0591 K14856 - gmx:100816774 1070.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1009 20 17785536 17790510 Amo10g0591 10 6721300 6727664 hybridization