Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0015 ATGAATTCATTCTCTATTGTGTTGTGTGTGTTAGGATTAGTGATTGTGGGTCATGTGGCCTATGCCCAAGACTCACAACAAGATTACCTTGATGCTCACAATGCAGCAAGATCCGAGGTTGGTGTTCCAAACTTGTCTTGGGATGACACCGTTGCAGCCTATGCACAAAACTACGCCAATCAGCGAAAAGGTGATTGCCAATTGGTCCATTCCAATGGCCAATATGGGGAGAACATTGCAGGGGGCAGCGGTGACTTTTCCGGCACGGTTGCCGTGAAATTATGGGTGGACGAGAAGCAATATTATGACTATAATTCTAATAGTTGTGCGAGTGGTCAAGTCTGTGGTCATTACACACAAGTAATTTGGCGCGATTCGATAAGACTTGGATGCGCTAAAGTAACTTGTGATAATAATGCGGGCACTTTTATTATTTGTAGCTATGATCCACCTGGCAATATCATTGGCCAAAAGCCTTACTAA 483 0.4389 MNSFSIVLCVLGLVIVGHVAYAQDSQQDYLDAHNAARSEVGVPNLSWDDTVAAYAQNYANQRKGDCQLVHSNGQYGENIAGGSGDFSGTVAVKLWVDEKQYYDYNSNSCASGQVCGHYTQVIWRDSIRLGCAKVTCDNNAGTFIICSYDPPGNIIGQKPY* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0015 160 Gene3D CAP 23 160 IPR035940 -
Amo10g0015 160 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 6 160 IPR001283 -
Amo10g0015 160 ProSitePatterns CRISP family signature 1. 116 126 IPR018244 GO:0005576
Amo10g0015 160 SMART SCP_3 24 156 IPR014044 -
Amo10g0015 160 ProSitePatterns CRISP family signature 2. 143 154 IPR018244 GO:0005576
Amo10g0015 160 CDD CAP_PR-1 26 160 - -
Amo10g0015 160 Pfam Cysteine-rich secretory protein family 30 148 IPR014044 -
Amo10g0015 160 PRINTS Allergen V5/Tpx-1 family signature 45 63 IPR001283 -
Amo10g0015 160 PRINTS Allergen V5/Tpx-1 family signature 91 104 IPR001283 -
Amo10g0015 160 PRINTS Allergen V5/Tpx-1 family signature 115 131 IPR001283 -
Amo10g0015 160 PRINTS Allergen V5/Tpx-1 family signature 143 156 IPR001283 -
Amo10g0015 160 SUPERFAMILY PR-1-like 20 160 IPR035940 -
Amo10g0015 160 PANTHER PATHOGENESIS-RELATED PROTEIN 1B-LIKE 6 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0015 Amo-Chr10 230467 230949 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0015 K13449 - gmx:100805116 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0720 20 10492665 10493144 Amo10g0015 10 230467 230949 hybridization