Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0836 ATGGCCACCCATAACAACCACCTCAATGGTGATGCTATATCCAACCGTCACGTGTCAAAGAAACCAAAGCTCGCTCCAACCGCTGCCGTCGCCGTCATCACCGAGGACGACCTCCACTCGGAATTCTCCCATCACGATCCCGCCGTCGCGCGCATCAACAACGGCAGCTTCGGATGCTGCCCTGCCTCCGTCATCGCCGCCCAGCGCCGGTGGCAGCTCCTCAACCTGCGGCAGCCTGACCATTTCTACTTCAACGAGCTCAAGAAAGGGATCCTCCACTCCCGCACCATCATAAAAGACCTCGTCAACGCGGAACACGTCGACGAGATCTCCATCGTCGACAACGCAACCACCGCCGCCGCCGTCGTCCTCCAACAAACCGCCTGGGCCTTCCACGAGGGAAGGTTCCAGAAAGGCGTCGACGCCGTTGTCATGCTCCACTACGCATACGGCTCCGTCAAGAAGTCCGTGGAGGCGTACGTGTCACGCGCCGGTGGCGACGTCATCCAGGTCCCCCTCCCCTTCCCCCTAACTTCCCCCAACGAAATCATAACAGAATTCCGTTGCGCATTGGAAAGAGCGAAATCTGGCGGGAAAACGGTTAGACTGGCAGTTATCGATCACGTGACTTCGATGCCCAGCGTGGTGATCCCCGTGAAGGAGTTAGTTAGAATCTGCAGAGAGGAAAGTGTGGATAAAGTTTTTGTGGATGCGGCCCACGGGATAGGGTGTACCAGCGTTGACATGCAAGAAATTGGGGCTGACTTTTACACCAGCAATTTGCACAAGTGGTTCTTTTGTCCACCTTCGATTGCGTTCTTGTACAGTCGCAAGAACTCCAGTTCTTGCGATCTGCATCACCCTGTGGTGTCTCATGAGTACGGCAACGGTTTAGCCGTTGAGAGTGCATGGATAGGGAATAGGGACTATAGTGCACAGCTTGTGGTGCCTGATGTGCTGGAATTTGTGAACAGGTTTGAAGGGGGAATTCAGGGGATTAAGAGGAGGAACCATGAAAAGGTTGTTGAGATGGGTCAGATGCTGGCTGCGGCTTGGGGGACACATCTCGGAAGCCCGCCGGAGATGTGTGCGAGTATGGCCATGGTTGGATTGCCGGCTTGCTTGGGGATTAGGTGTGATTTGGATGTGGCTAGGTTGAGGACTCATTTGAGGGATGAATTTGGGGTTGAGGTCCCTATTTATTTTCGAGCACCGGCAGCCGCGATCTCCGCTGGGGATGTGGTCACCGGCTATGCTCGGATTTCTTATCAGGTGTACAACAAAGTTGAGGACTATTATAAGTTCAGAGATGCCGTTGACCAGCTTGTGAACAGTGGCTTTACTTGTGCTCAGCTTTCAACTTGA 1365 0.5421 MATHNNHLNGDAISNRHVSKKPKLAPTAAVAVITEDDLHSEFSHHDPAVARINNGSFGCCPASVIAAQRRWQLLNLRQPDHFYFNELKKGILHSRTIIKDLVNAEHVDEISIVDNATTAAAVVLQQTAWAFHEGRFQKGVDAVVMLHYAYGSVKKSVEAYVSRAGGDVIQVPLPFPLTSPNEIITEFRCALERAKSGGKTVRLAVIDHVTSMPSVVIPVKELVRICREESVDKVFVDAAHGIGCTSVDMQEIGADFYTSNLHKWFFCPPSIAFLYSRKNSSSCDLHHPVVSHEYGNGLAVESAWIGNRDYSAQLVVPDVLEFVNRFEGGIQGIKRRNHEKVVEMGQMLAAAWGTHLGSPPEMCASMAMVGLPACLGIRCDLDVARLRTHLRDEFGVEVPIYFRAPAAAISAGDVVTGYARISYQVYNKVEDYYKFRDAVDQLVNSGFTCAQLST* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0836 454 Pfam Aminotransferase class-V 85 279 IPR000192 -
Amo09g0836 454 MobiDBLite consensus disorder prediction 1 21 - -
Amo09g0836 454 SUPERFAMILY PLP-dependent transferases 41 443 IPR015424 -
Amo09g0836 454 Gene3D - 73 314 IPR015421 GO:0003824
Amo09g0836 454 PANTHER L-CYSTEINE DESULFHYDRASE 9 453 - -
Amo09g0836 454 PANTHER ISOPENICILLIN N EPIMERASE-LIKE PROTEIN 9 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0836 Amo-Chr9 14771377 14774712 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0836 K22207 - gmx:100786129 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g0026 06 314497 318138 Amo09g0836 09 14771377 14774712 PCT
Amo09g0836 09 14771377 14774712 Amo06g0026 06 314497 318138 PCT