Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0026 ATGGATTCTCCCACCACCAACAATCACAACCACATCCACACTCACCACCTCAACGGCGCCTCCACCATTTCCCAACCATCYAAGAAGCCTAAGCTCTTATCATCATCCTTCATCACTCCCGCCGAGATTCACGAGGAATTCTCCCACCACGACCCCTCCGTTGCCCGCATCAACAACGGAAGCTTCGGCTGCTGTCCCGCCTCCGTCATCGCCGCCCAGCACCGCTCCCAGCTCCACTACCTCCGCCAGCCCGACAATTTCTACTTCAACGAACTCAAGAAAGGGATCCTCCAATCCCGCACCATTATCAAGGACCTCGTCAACGCCAAACACGTCGATGAGATCTCCATCGTCGACAACGCCACCACCGCCGCCGCCATCGTCCTCCAGCACACCGCTTGGTCCTTCCACGAAGGAACCTTCCAGAAGGGCGACGTTGTCCTCATGCTCCATTACGCTTACGGCGCCGTCAAAAAGTCCATGGAGGCCTACGTCACCCGCGCCGGAGGCCACGTCATCGAGGTACCCCTCCCTTTCCCCGTCGCTTCCAACGAAGAAATCGTTAGAGAGTTTAGAAAAGCATTGGAGAGAGGAAAGAGTGAGGGAAAGAGGATCAGGTTAGCCGTTATAGATCACGTTACTTCGATGCCGTGTGTGGTGATTCCGGTGAAGGAATTGGTTCAGATTTGTAGGGAGGAAGGGGTTGAAAAGGTTTTTATTGATGCTGCACATTCAATTGGGTGTGTTGATGTTGATATGGAAGAGATTGGTGCTGATTTTTATACCAGCAATTTGCATAAGTGGTTCTTTTGCCCTCCTTCCATTGCGTTTTTGTATACAAGGAAAACCCCTAAGGGGGGTTCTGAATTGCACCACCCTGTGGTGTCTCATGAATACGGCAATGGCTTGGCTGTGGAGAGTGCTTGGATTGGGACCAGGGACTATAGTGCCCAATTGGTGGTTCCTGCGGCTTTGGAATTCGTGAATCGGTTCCAAGGGGGAATCGAAGGGATCAAGAAGAGGAACCATGATGCTGTTGTGGAGATGGGGGAAATGCTTGCCCAATCATGGGGGACGCACCTTGGGAGTCCTCCGGATATGTGCGGTAGCATGATCATGGTGGGTTTGCCTACTTCTTTGGGGATTGCTTGTGATGATGATGCTCTTGGGTTAAGGGTGCATTTRAGGGAACAGTTTGGGGTTGAAGTCCCTATATACTATCGGCCGCCGAGAGATGGCGAAGTCGGGTGTGTAACTGGATATGCCCGGATTTCTCATCAAGTCTACAACAAAGTTGATGATTATCACAAGTTCAGGGATGCAGTTAACCAACTTGTCAATAATGGTTTTACCTGTGCTCTCCTTTCAGGCTAA 1374 0.5131 MDSPTTNNHNHIHTHHLNGASTISQPSKKPKLLSSSFITPAEIHEEFSHHDPSVARINNGSFGCCPASVIAAQHRSQLHYLRQPDNFYFNELKKGILQSRTIIKDLVNAKHVDEISIVDNATTAAAIVLQHTAWSFHEGTFQKGDVVLMLHYAYGAVKKSMEAYVTRAGGHVIEVPLPFPVASNEEIVREFRKALERGKSEGKRIRLAVIDHVTSMPCVVIPVKELVQICREEGVEKVFIDAAHSIGCVDVDMEEIGADFYTSNLHKWFFCPPSIAFLYTRKTPKGGSELHHPVVSHEYGNGLAVESAWIGTRDYSAQLVVPAALEFVNRFQGGIEGIKKRNHDAVVEMGEMLAQSWGTHLGSPPDMCGSMIMVGLPTSLGIACDDDALGLRVHLREQFGVEVPIYYRPPRDGEVGCVTGYARISHQVYNKVDDYHKFRDAVNQLVNNGFTCALLSG* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0026 457 MobiDBLite consensus disorder prediction 1 31 - -
Amo06g0026 457 PANTHER L-CYSTEINE DESULFHYDRASE 18 456 - -
Amo06g0026 457 PANTHER ISOPENICILLIN N EPIMERASE-LIKE PROTEIN 18 456 - -
Amo06g0026 457 Gene3D - 75 330 IPR015421 GO:0003824
Amo06g0026 457 Pfam Aminotransferase class-V 91 362 IPR000192 -
Amo06g0026 457 SUPERFAMILY PLP-dependent transferases 48 446 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0026 Amo-Chr6 314497 318138 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0026 K22207 - gmx:100786129 749.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g0026 06 314497 318138 Amo09g0836 09 14771377 14774712 PCT
Amo09g0836 09 14771377 14774712 Amo06g0026 06 314497 318138 PCT