Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0834 ATGGGGAACAAGTATTTGTTGTTGTCTCTCTGTTTGTGGGCTTTAACATGTTCCCTTCTTCCTTCGTTCTCATATGGACTCATGAGAATCGGTTTGAAGAAGAGAACTCTAGATCTTGAAGCCATCAAAGCTGCTAGAATGGTAAGAGAAAAGCTAAGATTGAGCAGGCCGATGATGGGTGCGAACGATCATTCTGTTAATAAGCCAGGCATCGAAGACGATATAGTACCTTTGAAGAATTATCTGGATGCACAGTATTATGGAGAGATTGGAATTGGAACACCACCGCAAACATTCAATGTCATCTTTGATACTGGCAGTTCTAACCTCTGGATTCCTTCATCAAAGTGCTACTTTTCTCTTGCCTGCTATACGCATCATTGGTACAAGTCATCGAAATCCAAAACATATGTAAAGAATGGAACATCATGTAAAATAGTGTATGGTTCTGGATCAATATCTGGCTTTTTCAGTCGTGATAGCGTTACAGTTGGTGATGTCGTGGTCAAGAATCAAGATTTCATCGAGGCTACGAGGGAAGGAAGTCTGTCCTTTGTGTTAGCGAAGTTCGATGGAATACTTGGTCTTGGATTTCAGGAGATCTCAGTCGAAAATGCCTTGCCAGTATGGGATAATATGGTGCTACAAAATCTTGTGAATGAGCCGGTTTTCTCTTTCTGGCTCAATGGGGATCCGAATGCGAAAAGTGGTGGTGAGCTAGTGTTTGGAGGTGTTGATCCGAAGCACTTTGTAGGAAACCATACCTATGTTCCAGTTACTACAAAAGGTTACTGGCAGATTGAAATGGGAGATTTTTACATTGGTGGTGTGTCAACAGGTGTTTGTGAGGGTGGCTGTGCTGCTATTGTGGATTCCGGAACGTCTTTGCTCGCTGGTCCAACTACTGTTGTGACTGAAATCAATCATGCTATTGGAGCTGAAGGAGTTCTGAGTGTAGAATGCAAGGAAGTTATTTCTCAATATGGAGAGTTGATATGGGATCTCTTGGTCTCCGGGGTACGAGCTGATGATGTGTGTTCGCAAGTTGGTTTATGTACAATGAGGGATCAATCTAAAAGTGCTGGGATTGAGATGGTGACTGAAAAGGAACAGAAAGATTTGTCAGCTAAAGATACTGCTTTGTGCACTTCCTGTCAGATGCTTGTGATTTGGATCCAGAATCAATTGCGACAAGAGTCGACCAAGGACAGAGTTTTCAACTATGTAAATCAGTTGTGTGAGAGCTTGCCGAGTCCGAATGGCGAGTCGGTAGTAGACTGTCAGAGCATTCATATATTGCCAAACATCACTTTTACAATCGGAGATAAACATTTCACCCTCTCGCCGGATCAGTATATTCTGAAAACTGGAGAAGGCATTGCTGAAGTTTGTCTTAGTGGGTTTATCGCATTCGACATACCCCCGCCACGCGGTCCTCTCTGGATTCTGGGCGATATCTTCATGAGGGTATATCACACGGTCTTTGACTCTGGGAATCTCCGACTTGGTTTCGCCAAAGCTGCGTAA 1527 0.4335 MGNKYLLLSLCLWALTCSLLPSFSYGLMRIGLKKRTLDLEAIKAARMVREKLRLSRPMMGANDHSVNKPGIEDDIVPLKNYLDAQYYGEIGIGTPPQTFNVIFDTGSSNLWIPSSKCYFSLACYTHHWYKSSKSKTYVKNGTSCKIVYGSGSISGFFSRDSVTVGDVVVKNQDFIEATREGSLSFVLAKFDGILGLGFQEISVENALPVWDNMVLQNLVNEPVFSFWLNGDPNAKSGGELVFGGVDPKHFVGNHTYVPVTTKGYWQIEMGDFYIGGVSTGVCEGGCAAIVDSGTSLLAGPTTVVTEINHAIGAEGVLSVECKEVISQYGELIWDLLVSGVRADDVCSQVGLCTMRDQSKSAGIEMVTEKEQKDLSAKDTALCTSCQMLVIWIQNQLRQESTKDRVFNYVNQLCESLPSPNGESVVDCQSIHILPNITFTIGDKHFTLSPDQYILKTGEGIAEVCLSGFIAFDIPPPRGPLWILGDIFMRVYHTVFDSGNLRLGFAKAA* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0834 508 SUPERFAMILY Saposin 317 417 IPR011001 -
Amo09g0834 508 Gene3D - 316 417 - -
Amo09g0834 508 ProSiteProfiles Saposin B type domain profile. 316 356 IPR008139 -
Amo09g0834 508 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 101 112 IPR001969 GO:0004190|GO:0006508
Amo09g0834 508 ProSiteProfiles Peptidase family A1 domain profile. 86 505 IPR033121 -
Amo09g0834 508 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 4 508 IPR001461 GO:0004190|GO:0006508
Amo09g0834 508 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 288 299 IPR001969 GO:0004190|GO:0006508
Amo09g0834 508 Pfam Eukaryotic aspartyl protease 85 507 IPR033121 -
Amo09g0834 508 PRINTS Pepsin (A1) aspartic protease family signature 92 112 IPR001461 GO:0004190|GO:0006508
Amo09g0834 508 PRINTS Pepsin (A1) aspartic protease family signature 238 251 IPR001461 GO:0004190|GO:0006508
Amo09g0834 508 PRINTS Pepsin (A1) aspartic protease family signature 288 299 IPR001461 GO:0004190|GO:0006508
Amo09g0834 508 PRINTS Pepsin (A1) aspartic protease family signature 481 496 IPR001461 GO:0004190|GO:0006508
Amo09g0834 508 ProSiteProfiles Saposin B type domain profile. 378 419 IPR008139 -
Amo09g0834 508 Pfam Saposin-like type B, region 1 381 417 IPR007856 GO:0006629
Amo09g0834 508 PANTHER FUNGAL PROTEINASE A, ASPARTIC PROTEINASE SUPERFAMILY PROTEIN 4 508 - -
Amo09g0834 508 SUPERFAMILY Acid proteases 17 507 IPR021109 -
Amo09g0834 508 Gene3D Acid Proteases 245 508 IPR021109 -
Amo09g0834 508 Gene3D Acid Proteases 28 244 IPR021109 -
Amo09g0834 508 SMART sapb_4 280 352 IPR008139 -
Amo09g0834 508 Pfam Saposin-like type B, region 2 320 352 IPR008138 -
Amo09g0834 508 CDD phytepsin 76 506 IPR033869 GO:0004190
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0834 Amo-Chr9 14750170 14755164 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0834 K08245 - gmx:100776327 898.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g0031 06 345652 349664 Amo09g0834 09 14750170 14755164 PCT
Amo09g0834 09 14750170 14755164 Amo06g0031 06 345652 349664 PCT