Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0353 ATGGATTCAAATTTAAGCAGAAGCATAAGCAGGAGCTTAAGCAGATCAAGTTGGAAAATGGAAGAGGTATTTGCAAGTGGGAGATATTCAAGGAGAACCTCACATGTTGATGAAGATGAAGAGGCTCTGAAATGGGCTGCAATTGAGAAGCTTCCAACCTATGATAGGTTGAGAACAAGTATCATTCAGAATTTTGGTGAAGGTGATCATCATCATCATGATGCCAAGGCTCAGCATAGAGAAGTTGATGTTAGGAAGCTTGACATGAATGAGAGGCAACAAATCATTGATCAAATCTTCAAGGTTGCTGAAGAGGATAATGAGAAGTTCTTGACCAAGTTCAGAAACAGAATTGACAAGGTTGGAATCAAACTTCCAACAGTTGAAGTAAGGTTTCAGAATTTGACAGTTGAGGCTAATTCCTATATTGGAAGCAGAGCTTTGCCAACACTTCCAAACACTGCATTGAACATTCTAGAATCAGCACTTGGCATGTGTGGGATTAGTACTACTAAAAGAACAAAGCTCACAATTCTTAAGAATGCATCCGGGATTGTTAAACCCTCGAGGATGGCCCTTTTACTTGGCCCACCTTCTTCAGGAAAAACAACTCTTTTGTTGGCATTGGCTGGAAAATTGGACTCTGAATTGAAGGTAACTGGAGAAATTAGTTATAATGGGCATAGGCCTAATGAATTTGTGCCAAGAAAGACTTCAGCATACATTAGCCAAAATGATGTTCATGTTGGAGAAATGACAGTTAAGGAGACACTTGATTTCTCAGCTAGGTGCCAAGGAGTTGGAACTAGATATGATCTATTAGCTGAGGTTGCTAGAAGAGAAAAGGAAGCTGGCATATTTCCAGAGGCAGAACTTGACCTTTTCATGAAGGCAACTGCAATGGAAGGAACAGAAAGCAGTCTCATCACTGATTATACTCTTAAAATTTTAGGTCTTGATATTTGCAAGGATACTATTGTTGGAGATGAAATGCATAGAGGCGTATCCGGTGGCCAAAAGAAGCGTGTCACAACTGGTGAGATGATTGTTGGGCCCACAAAAACACTGTTTATGGATGAGATATCCACTGGTCTTGATAGCTCCACAACATATCAAATAGTGAAATGCTTGCAACAAATTGTGCACCTCACTGAAGGAACAATCCTAATGTCCCTTCTCCAACCAGCTCCTGAGACATTCAATCTCTTTGATGACATCATTCTCATTTCTGAGGGCCAAATTGTCTACCAGGGTCCACGTGAGCACATTGTTGAGTTCTTTGAATCATGTGGGTTCAAATGCCCTGAGAGAAAGGGCATTGCTGACTTTTTACAAGAGGTTACCTCAAGAAAGGATCAAGAACAATATTGGGCAGACAGAAACATACCATACCGTTATGTAACTGTAACAGAATTTGCAAACAAGTTCAAAAGATTCCATGTTGGAATGGAACTGGAAAACGAGCTAAGAGTGCCATTTGACAGATCAAGAGCACACAAAGCAGCACTTGTATACAACAAATGGTCAGTTCCCAAAATGGACCTTCTAAGAGCATGTTGGGACAAAGAGTGGCTCCTCATYAAGAGGAACTCATTTGTCTACATCTTCAAGACTGTCCAGATCATCATTATCGCCTTCATCGCCGCCACCATGTTTATAAGGACGAGAATGCACCGGCGAAATGAGGACGATGCAGCCCTCTACGTTGGCGCAATCTTGTTTAGCATGATCATGAACATGTTCAATGGTTTTGCTGAGCTTGCACTCACCATTCAAAGGCTTCCTGTGTTTTACAAGCAGAGGGATCATCTTTTCCACCCTGCTTGGACTTACACTCTTCCCAATTTCCTCTTGAGGATTCCAATTTCGATATTCGAGTCTCTTGTTTGGGTGCTTGTTACCTACTACACTATAGGATTTGCTCCTGAAGCTGAGAGGTTCTTCAAGCAACTTTTGTTGGTGTTCCTTGTTCAACAAATGGCTGCTGGAATGTTTAGGTTCATTTCTGGAGTCTGCAGAACAATGATCATAGCAAACACTGGTGGTGCACTCATGCTTCTTCTTGTTTTCCTTCTTGGTGGTTTCATCCTTCCGAAACGTGAAATTCCAAATTGGTGGGTGTGGGGATACTGGGTTTCACCACTATCATATGCTTTCAATGCCCTTGCTGTGAATGAATTATATGCACCAAGATGGAACAAACCATCTCCTACACAGGCAAATTTGACATTAGGTGTGTCTACATTAAGAAACTTTGATGCTTTTGCCAACAAGAACTGGTACTGGATTGGTGCAGGATCACTTTTAGCCTTCACTATTTTGTACAATGTTCTGTTCACTCTTGCACTTATGTACCTAAATCCTCTTGGAAAGAAACAAGCAATTATAACTGAAGAAGATGCGAGCGAAATGGAGGTGGGCGAAGAACCAAGACTCATTAGGCCACCAGAAACCAACCGAGAATCAATGCGCCGGTCATTATCTAAGGCTGATGGAAATAACTCAAGTGAAGTTGCGATGCAGCGAATGAGCAGCCGGGCTAATCCCAATGGAACAAGAAATTCTGATTCGACACTTGATTCGGCCACTGGTGTAGCCCCAAAGAGAGGAATGATTCTACCTTTCCAGCCACTTGCAATGTCCTTTGACAGTGTTAATTACTATGTGGACATGCCTGCAGAAATGAAAGAGCAAGGAGTGGCAGAGGATAGGCTGCAACTTCTGAGGGAAGTAACAAGTGCCTTTAGGCCTGGAGTCTTGACTGCTCTGATGGGAGTCAGTGGAGCTGGGAAGACAACTTTGATGGATGTTTTGGCCGGAAGAAAGACCGGTGGTTACATTGAAGGAGATATTAGAATCTCCGGGTTCCCTAAGAAGCAAGAAACCTTTGCTAGAGTTTCAGGTTACTGCGAACAGACCGATATTCATTCGCCACAAGTTACTATCCGAGAATCTTTGCTTTACTCGGCATTCCTTCGCTTACCTAAAGAAGTTAGCCGTGAAGAAAAGACACAATTTGTGGACCAAGTTATGGACTTGGTAGAGTTGGATAGTCTCAAGGATGCTATAGTTGGGCTTCCAGGAGTTACAGGGCTGTCGACMGAACAGCGAAAGAGGCTGACAATCGCTGTCGAGCTTGTTGCTAATCCTTCAATCATTTTCATGGATGAACCAACCTCAGGTCTTGATGCAAGAGCAGCAGCCATTGTTATGAGAACAGTGAGGAACACTGTGGACACTGGAAGAACAGTTGTCTGCACAATTCACCAGCCTAGCATAGATATCTTTGAAGCTTTTGACGAGCTCTTGCTAATGAAAAGAGGAGGGCAAGTGATCTACTCAGGACCTTTAGGCCGGAATTCGCACAAGATTGTAGAATACTTCGAGGCAATTCCAGGTGTCCCAAAGATCAAGGAAATGTACAACCCTGCAACATGGATGCTTGAAGTAAGTTCCATTGCAGCCGAAGTCCGGCTTGGAATGGACTTTGCTGAATACTACAAGAACTCTGCTTTGTTCCAGCGCAACAAAACTCTTGTGAAGGAGCTAAGCACGCCGCCTCCTGGCGCAAAGGATCTATATTTCCCCACCAAGTACTCTCAAAATGCATGGGGTCAGTTCACATCTTGTTTATGGAAGCAATGGCTGACATATTGGAGAAGTCCAGATTACAATCTTGTTAGATTCTTCTTCACCTTAGCAAGTGCTCTCATGATTGGGACAGTGTTCTGGAGAGTTGGCAAGCACACGTTGACCACATCTAGCTTGACCATGGTTATTGGAGCAATGTATGCTGCAGTTATTTTCGTTGGAATTAACAACTGCCAAACTGTCCAACCGGTAGTAGCCATTGAACGAACTGTATTCTATCGAGAAAGAGCAGCCGGAATGTATGCTCCTATGCCTTATGCTATTGCACAGGTTCTTACTGAGATTCCTTATGTCTTCATCCAATCTGTGTATTACTCACTCATAGTGTATGCAATGGTGTCCTTTGACTGGAAGGTGGAGAAGTTCTTTTGGTTCTTCTTTGTCAGCTTCTTCTCCTTCTTGTACTTCACATACTATGGCATGATGACTGTTTCCATCACACCAAACCATCAAGTTGCATCGATCTTCGCAGCAGCATTCTATGGACTCTTCAATCTCTTCTCTGGTTTCTTTATCCCAAGACCTAAAATTCCTAAATGGTGGGTTTGGTACTACTGGATTTGTCCTGTGGCATGGACAGTGTATGGACTAATCGTTTCGCAGTACAGAGATATCACCACCGAAATGTTTATAGCCAGCGAAAATAGGAACTACACTGTCAAAGATTATATTAACCACCATTATGGTTTCAAATCAGACTTCATGGGACCAGTTGCTGCAGTTTTGGTGCTTTTCGCTGTCTTCTTCGCCTTTGTGTTTGCCGTATGCATCAGGGCACTGAACTTCCAAACAAGATAA 4449 0.4282 MDSNLSRSISRSLSRSSWKMEEVFASGRYSRRTSHVDEDEEALKWAAIEKLPTYDRLRTSIIQNFGEGDHHHHDAKAQHREVDVRKLDMNERQQIIDQIFKVAEEDNEKFLTKFRNRIDKVGIKLPTVEVRFQNLTVEANSYIGSRALPTLPNTALNILESALGMCGISTTKRTKLTILKNASGIVKPSRMALLLGPPSSGKTTLLLALAGKLDSELKVTGEISYNGHRPNEFVPRKTSAYISQNDVHVGEMTVKETLDFSARCQGVGTRYDLLAEVARREKEAGIFPEAELDLFMKATAMEGTESSLITDYTLKILGLDICKDTIVGDEMHRGVSGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEGTILMSLLQPAPETFNLFDDIILISEGQIVYQGPREHIVEFFESCGFKCPERKGIADFLQEVTSRKDQEQYWADRNIPYRYVTVTEFANKFKRFHVGMELENELRVPFDRSRAHKAALVYNKWSVPKMDLLRACWDKEWLLIKRNSFVYIFKTVQIIIIAFIAATMFIRTRMHRRNEDDAALYVGAILFSMIMNMFNGFAELALTIQRLPVFYKQRDHLFHPAWTYTLPNFLLRIPISIFESLVWVLVTYYTIGFAPEAERFFKQLLLVFLVQQMAAGMFRFISGVCRTMIIANTGGALMLLLVFLLGGFILPKREIPNWWVWGYWVSPLSYAFNALAVNELYAPRWNKPSPTQANLTLGVSTLRNFDAFANKNWYWIGAGSLLAFTILYNVLFTLALMYLNPLGKKQAIITEEDASEMEVGEEPRLIRPPETNRESMRRSLSKADGNNSSEVAMQRMSSRANPNGTRNSDSTLDSATGVAPKRGMILPFQPLAMSFDSVNYYVDMPAEMKEQGVAEDRLQLLREVTSAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARVSGYCEQTDIHSPQVTIRESLLYSAFLRLPKEVSREEKTQFVDQVMDLVELDSLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIVEYFEAIPGVPKIKEMYNPATWMLEVSSIAAEVRLGMDFAEYYKNSALFQRNKTLVKELSTPPPGAKDLYFPTKYSQNAWGQFTSCLWKQWLTYWRSPDYNLVRFFFTLASALMIGTVFWRVGKHTLTTSSLTMVIGAMYAAVIFVGINNCQTVQPVVAIERTVFYRERAAGMYAPMPYAIAQVLTEIPYVFIQSVYYSLIVYAMVSFDWKVEKFFWFFFVSFFSFLYFTYYGMMTVSITPNHQVASIFAAAFYGLFNLFSGFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYRDITTEMFIASENRNYTVKDYINHHYGFKSDFMGPVAAVLVLFAVFFAFVFAVCIRALNFQTR* 1483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0353 1482 Gene3D - 894 1128 IPR027417 -
Amo09g0353 1482 Pfam ABC-2 type transporter 394 468 IPR043926 GO:0140359
Amo09g0353 1482 Pfam ABC-2 type transporter 1089 1149 IPR043926 GO:0140359
Amo09g0353 1482 Gene3D - 166 471 IPR027417 -
Amo09g0353 1482 SMART AAA_5 917 1109 IPR003593 -
Amo09g0353 1482 SMART AAA_5 188 420 IPR003593 -
Amo09g0353 1482 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 163 436 IPR003439 GO:0005524
Amo09g0353 1482 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 435 IPR027417 -
Amo09g0353 1482 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 9 1482 - -
Amo09g0353 1482 Pfam ABC transporter 908 1060 IPR003439 GO:0005524
Amo09g0353 1482 Pfam ABC transporter 179 361 IPR003439 GO:0005524
Amo09g0353 1482 CDD ABCG_PDR_domain1 172 418 IPR034001 -
Amo09g0353 1482 CDD ABCG_PDR_domain2 877 1115 IPR034003 -
Amo09g0353 1482 MobiDBLite consensus disorder prediction 828 862 - -
Amo09g0353 1482 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 880 1132 IPR003439 GO:0005524
Amo09g0353 1482 MobiDBLite consensus disorder prediction 806 827 - -
Amo09g0353 1482 Pfam Plant PDR ABC transporter associated 732 796 IPR013581 -
Amo09g0353 1482 PANTHER ATP-BINDING CASSETTE TRANSPORTER 9 1482 - -
Amo09g0353 1482 MobiDBLite consensus disorder prediction 801 863 - -
Amo09g0353 1482 Pfam ABC-transporter N-terminal 90 153 IPR029481 -
Amo09g0353 1482 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 903 1117 IPR027417 -
Amo09g0353 1482 Pfam ABC-2 type transporter 516 727 IPR013525 GO:0016020|GO:0140359
Amo09g0353 1482 Pfam ABC-2 type transporter 1206 1419 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0353 Amo-Chr9 4024499 4033688 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0353 K08711 - gmx:100798588 2525.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0331 19 4244729 4254569 Amo09g0353 09 4024499 4033688 hybridization
Amo19g0331 19 4244729 4254569 Amo09g0353 09 4024499 4033688 PCT
Amo09g0353 09 4024499 4033688 Amo19g0331 19 4244729 4254569 PCT
Amo09g0353 09 4024499 4033688 Amo09g0353 09 4024499 4033688 PCT