Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0348 ATGGCCTCTTACAGGCCCTTCCCTCCGCAATCTAGTCAAAACCCTAACCATCAGTATAATCAGAATTGGAGTGGTGGTTATGGTGGTGCTGGTGGTGCTGGTGGAGACCCTTCTACTTCAAATTCATTCCCTCCACAACCTTATAACCAAATGCCCCCAAATTCAAATTTCCATTCTCATGGTGGGGGTGCTGCACCACCACCTCCTCCTCCTTCCCATCACCCCTACCCTTATCCACCACCTCCACCGCCACCACCCGAAAATTCATACCCGCCTCCACCTCCACCACCRCCTTCTTCACATGGTGCTCCTATGTSTTACCCTTCTAGTCAATACTCTCAGTATGGGCAGCAGCCACCTCCACCACCTCCCCCTCTGCCTCCATCTTCGCCTCCGCCGAGCAATTCTATCCCACCTCCACCCCCTCCACCTTCCTCGCCRCCTCCTCCTCCTGCTTCAGCTCCTCCCCCGCCGCCACCAAAGGATGAGAGRCGGATGCATAGCCGAGATAAAGGGCCGATAAAGGAAGGTTATGAGCATTCAAATCATGGAAATCCTCATAAACAGCAGAAGCCTTCTGCTGTTCCTCCAATGCCAGGGAAGAAGCCGAACGGGGTGCAGGGGAGGGTTGAGACAGAAGAAGAGAGGAGGTTAAGGAAGAAGAGAGAATTTGAGAAGCAGAGGCAAGAAGAGAAGCATAGGCAGCAGCTGAAGGAATCACAGAACAGTGTCTTGCAGAAGACTCAGATGATGTCATCTGGGAAGGGGCATGGTTCGGGTTCGGTTGCAGGGTCTCGAATGGCAGCAGAGAAGAGAACTACACCCTTATTGAGTGCGGAGAGAATTGAAAATAGGTTGAAAAAGCCAACAACATTTTTGTGCAAAATGAAATTCCGAAATGAACTTCCAGATCCAAGTGCACAACCTAAGCTTATGGCGTTCAAGAGGGATAAAGATCAATATACGAAATATACAATCACGTCGCTGGAGAAAATGTACAAACCCAAACTTTTTGTGGAACCAGATCTTGGGATTCCTCTGGACCTGCTTGACCTCAGTGTTTATAACCCTCCCAGTGTCAGACTACCTCTTGCTCCSGAAGACGAAGATTTGTTGCGAGATGATGTTGCGGCTACTCCTATAAAGAAAGACGGCTTAAAAAGAAAAGACAGGCCTACTGATAAAGGTGTAGCTTGGCTTGTGAAAACACAATATATATCTCCCCTCAGCATGGATTCAACAAAACAGTCTTTAACCGAAAAACAAGCTAAGGAGCTGAGAGAGATGAGAGGAGGCCGCAGCATGTTGGACAGTCGTAACAGTAGGGAAAGACAGATCAGGGAAATCGAAGCATCATTTGAAGCAGCTAAGTCACGCCCTGTTCATGCAACCAACAAATCTTTGTATCCTGTTGAGGTTTTGCCTTTGTTACCTGATTTTGATAGGTATGATGAACAGTTTGTTATTGCTGCATTTGATAATGCTCCTACAGCTGATTCAGAAATGTATAGTAAGTTGGACAAATCTGTTCGYGATGCCTGTGAATCAAAGGCACTTATGAAAAGTTATGTTGCAACCGGCTCAGATCCTGCAAATCCTGAGAAATTTTTGGCTTACATGACCCCAACACCTGGACAGCTGTCAAAGGATATATATGATGAAAATGAAGATGTCTCATATTCTTGGGTTCGCGAGTATCACTGGGATGTTCGGGGTGATGATGCAGATGACCCTACAACATTCCTAGTTGCATTTGATGAGTCAGAAGCACGTTATGTGCCTCTTCCAACAAAACTTGTTTTAAGAAAAAAGAGGGCTAAAGAGGGAAGATCAAGTGATGAGGTCGAGCAATTTCCAATACCTGCAAGAGTGACTGTACGGCGGAGGTCAAGTGTTGCAGCAATTGAGCGAAAGGATTCACAGGTTTATACAAGTTCGAAAGCCAGTACATCAAAGAGAAGGGGTCTAGAAATGGATGATGATCTTGAACAGCATCATCGACACAATTATCAATCTAGTGGAGCTGAAGATGACATGTCTGATTAA 2046 0.4619 MASYRPFPPQSSQNPNHQYNQNWSGGYGGAGGAGGDPSTSNSFPPQPYNQMPPNSNFHSHGGGAAPPPPPPSHHPYPYPPPPPPPPENSYPPPPPPPPSSHGAPMXYPSSQYSQYGQQPPPPPPPLPPSSPPPSNSIPPPPPPPSSPPPPPASAPPPPPPKDERRMHSRDKGPIKEGYEHSNHGNPHKQQKPSAVPPMPGKKPNGVQGRVETEEERRLRKKREFEKQRQEEKHRQQLKESQNSVLQKTQMMSSGKGHGSGSVAGSRMAAEKRTTPLLSAERIENRLKKPTTFLCKMKFRNELPDPSAQPKLMAFKRDKDQYTKYTITSLEKMYKPKLFVEPDLGIPLDLLDLSVYNPPSVRLPLAPEDEDLLRDDVAATPIKKDGLKRKDRPTDKGVAWLVKTQYISPLSMDSTKQSLTEKQAKELREMRGGRSMLDSRNSRERQIREIEASFEAAKSRPVHATNKSLYPVEVLPLLPDFDRYDEQFVIAAFDNAPTADSEMYSKLDKSVRDACESKALMKSYVATGSDPANPEKFLAYMTPTPGQLSKDIYDENEDVSYSWVREYHWDVRGDDADDPTTFLVAFDESEARYVPLPTKLVLRKKRAKEGRSSDEVEQFPIPARVTVRRRSSVAAIERKDSQVYTSSKASTSKRRGLEMDDDLEQHHRHNYQSSGAEDDMSD* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0348 681 MobiDBLite consensus disorder prediction 63 103 - -
Amo09g0348 681 Coils Coil 210 230 - -
Amo09g0348 681 MobiDBLite consensus disorder prediction 1 25 - -
Amo09g0348 681 MobiDBLite consensus disorder prediction 637 681 - -
Amo09g0348 681 MobiDBLite consensus disorder prediction 160 186 - -
Amo09g0348 681 MobiDBLite consensus disorder prediction 637 651 - -
Amo09g0348 681 MobiDBLite consensus disorder prediction 207 238 - -
Amo09g0348 681 MobiDBLite consensus disorder prediction 1 282 - -
Amo09g0348 681 PRINTS Proline rich extensin signature 64 80 - -
Amo09g0348 681 PRINTS Proline rich extensin signature 119 144 - -
Amo09g0348 681 PRINTS Proline rich extensin signature 1 15 - -
Amo09g0348 681 PRINTS Proline rich extensin signature 81 98 - -
Amo09g0348 681 MobiDBLite consensus disorder prediction 652 674 - -
Amo09g0348 681 MobiDBLite consensus disorder prediction 115 159 - -
Amo09g0348 681 PANTHER RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG 135 680 IPR007133 GO:0006368|GO:0016570|GO:0016593
Amo09g0348 681 SUPERFAMILY Formin homology 2 domain (FH2 domain) 139 284 - -
Amo09g0348 681 Pfam Paf1 292 628 IPR007133 GO:0006368|GO:0016570|GO:0016593
Amo09g0348 681 MobiDBLite consensus disorder prediction 239 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0348 Amo-Chr9 3968259 3973856 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0348 K15174 - gmx:100800148 785.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0336 19 4321907 4325766 Amo09g0348 09 3968259 3973856 hybridization