Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0027 ATGCTTGGTTTGGGTGCGGACCTCTTGTGGGCCGACATGAACCGTCTTCTTGCTTTTCTCTTCCACCAGGGAGTGTTGGATGAGCAATTCTTGCAGCTTCAGCAGTTGCAGGATGAGACGTCTCCAAACTTTGTCTCCGAAGTAGTGAACATTTACTTTCATGAATCGGAAAAGCTTCTAAGGAATCTGAGAGGGTTGTTAATGGAAAGAGAGTTTTCAGATTACAAGAAAATGGGAATCCATTTGAATCAATTAATGGGAAGCAGCTCAAGCATTGGCGCCAAGAGAGTCACCAATATGTTTGCGAGCGCTGGAGATGCTTGA 324 0.4506 MLGLGADLLWADMNRLLAFLFHQGVLDEQFLQLQQLQDETSPNFVSEVVNIYFHESEKLLRNLRGLLMEREFSDYKKMGIHLNQLMGSSSSIGAKRVTNMFASAGDA* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0027 107 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 9 100 IPR036641 GO:0000160
Amo09g0027 107 PANTHER - 1 101 IPR045871 GO:0000160|GO:0009927|GO:0043424
Amo09g0027 107 Gene3D HPT domain 4 104 IPR036641 GO:0000160
Amo09g0027 107 PANTHER PSEUDO HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 6 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0027 Amo-Chr9 328498 329740 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0027 K14490 - gmx:100789608 179.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0192 19 2197144 2199630 Amo09g0027 09 328498 329740 hybridization
Amo19g0192 19 2197144 2199630 Amo09g0027 09 328498 329740 PCT
Amo09g0027 09 328498 329740 Amo09g0027 09 328498 329740 PCT
Amo09g0027 09 328498 329740 Amo19g0192 19 2197144 2199630 PCT