Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2462 ATGGCTGCTACAATGGAAGATAGTCCAAGAAGTCCAGAGGCAAAGCTTGGAATGAGAGTAGAAGATCTTTGGGATGTTCAAGAACCACAACTAAGTCCTAATGAGAAGCTCAATGCTTGTTTTGAAAGCATACCTGTCTCTGCTTTCCCTCCACCTCCTTCAAACCAAGAAATTGAGATAAAATCAGATGCTACCTTAGCTGAAGCAGTTGAAATACTAGCAGAACACAACATCCTGAGTGCACCTGTGGTGGATGTTGATGCACCTGAAGATGCCAGCTGGATTGACAGATACATAGGGATAGTTGAATTTGCAGGAATTGTTGTGTGGATTCTTCATCAGTCTGATCCTACATCTCCTAAGAGTCCATCAAGTAGATCCAATGGAACTGCAATTGAAGCTGCAACTAATGGCATGGCTTCTCTACAACTTGAGGGCAAGGACCTTGGATCTTCTACAACAACTTCAGGGAACTTCTTTGAGGATCTCACTTCTTCTGAACTTTATAAGAATACCAAGGTTAGAGATATCTCAGGATCATTTCGGTGGGCCCCATTTCTAGCACTGGAGAGGTCAAACTCATTCTTGACCATGCTATTGCTACTCTCAAAGTACAAGATGAAGAGTATTCCTGTGGTGGACTTAGGTGCTGGAAGAATTGATCAAATCATTACTCAATCTGCTGTGATACACATGTTGGTTGAATGTGCTGGTCTTCAATGGTTTGAGAGCTGGGGAACCAAGAAAATATCTGAAGTTGGTCTTCCCCTAGTCACACCAAATCATATCATCAAGGTATATGAGGATGAACCAGTGCTTCAAGCCTTTAGATTGATGAGAAAAAAGAGGATTGGAGGTGTGCCTGTAGTGGAAAGGGGTGGCAACAATCCAGTTGGTAATATAAGCCTCCATGATGTTCAGTTCTTGCTAACTGCCCCAGAAATATACCATGATTATAGAGCAATTACTGCCAAGGATTTCCTAACAGCTGTTAAAAGCTACTTGAAGAAGCATGAAAAGGTTGTTTCTATGTCAAGGGGTTTGATTACTTGCAAAAAGGATTGTACAATAAAAGAGTTGATCCAATTGCTAGATCATGAAAAGATTCACAGGGTCTATGTTGTGGATGATGATGGAAATCTTGAAGGACTCGTCACTCTAAGAGACATAATCTCAAGGCTTGTACATGAGCCACGTGGCTACTTTGGTGATTTCTTTGATGGCGTTCTTCCCATGCCTCCAAATAGTAGGGTTTAA 1257 0.4161 MAATMEDSPRSPEAKLGMRVEDLWDVQEPQLSPNEKLNACFESIPVSAFPPPPSNQEIEIKSDATLAEAVEILAEHNILSAPVVDVDAPEDASWIDRYIGIVEFAGIVVWILHQSDPTSPKSPSSRSNGTAIEAATNGMASLQLEGKDLGSSTTTSGNFFEDLTSSELYKNTKVRDISGSFRWAPFLALERSNSFLTMLLLLSKYKMKSIPVVDLGAGRIDQIITQSAVIHMLVECAGLQWFESWGTKKISEVGLPLVTPNHIIKVYEDEPVLQAFRLMRKKRIGGVPVVERGGNNPVGNISLHDVQFLLTAPEIYHDYRAITAKDFLTAVKSYLKKHEKVVSMSRGLITCKKDCTIKELIQLLDHEKIHRVYVVDDDGNLEGLVTLRDIISRLVHEPRGYFGDFFDGVLPMPPNSRV* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2462 418 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 8 418 - -
Amo08g2462 418 SUPERFAMILY CBS-domain pair 223 404 IPR046342 -
Amo08g2462 418 Gene3D - 36 239 IPR046342 -
Amo08g2462 418 SUPERFAMILY CBS-domain pair 30 235 IPR046342 -
Amo08g2462 418 CDD CBS_pair_SF 60 119 - -
Amo08g2462 418 PANTHER BNAA06G16460D PROTEIN 8 418 - -
Amo08g2462 418 CDD CBS_pair_SF 199 306 - -
Amo08g2462 418 ProSiteProfiles CBS domain profile. 53 118 IPR000644 -
Amo08g2462 418 ProSiteProfiles CBS domain profile. 344 402 IPR000644 -
Amo08g2462 418 CDD CBS_pair_SF 262 391 - -
Amo08g2462 418 ProSiteProfiles CBS domain profile. 258 319 IPR000644 -
Amo08g2462 418 SMART cbs_1 347 395 IPR000644 -
Amo08g2462 418 SMART cbs_1 185 234 IPR000644 -
Amo08g2462 418 SMART cbs_1 56 112 IPR000644 -
Amo08g2462 418 SMART cbs_1 262 311 IPR000644 -
Amo08g2462 418 Gene3D - 247 397 IPR046342 -
Amo08g2462 418 Pfam CBS domain 58 103 IPR000644 -
Amo08g2462 418 Pfam CBS domain 263 306 IPR000644 -
Amo08g2462 418 Pfam CBS domain 344 395 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2462 Amo-Chr8 38439387 38442888 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2462 - - gmx:100776754 705.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g2134 01 64220443 64223821 Amo08g2462 08 38439387 38442888 PCT
Amo08g2462 08 38439387 38442888 Amo01g2134 01 64220443 64223821 PCT