Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2410 ATGCCACACAGTCCTTTAGTTTTCACCTTTGGAATTCTAGGCAACATTGCTTCCTTTGTATGCTTTCTAGCACCACTACCAACATTTTATAGAGTATGCAAGAAGAAATCAACAGAAGGATTCCAATCAATTCCATATGTGGCAGCACTCTTCAGTGCAATGCTTTGGATCTTCTATGCCTATGTCAAAACCGGAGAAACTCTTCTTATCACAATCAATGCATTTGGTTGTGTCATTGAGACTATTTACCTTGCCATTTTCATCACTTACTGCCCCAAGAAAGTTAGGATGTCCACATTGAGGATGATTCTATTATTGAACTTTGGAGGATTTTGCACAATTGTTCTATTAACACATATCCTAGCAAAAGGAGCAAATCGTCCCAAGCTTCTTGGATGGATTTGTGTTGTCTTTGCCACTAGTGTTTTTGCAGCACCTTTGAGCATCATTAGGACGGTTATCCGAACCAAAAGCGTGGAGTTCCTTCCTTTTCCTCTTTCTCTTCTTCTCTTTATTAGCGCAATCATGTGGCTATTGTACGGCATCTTTCTCAAAGACATCTACGTTACTCTCCCGAACGTTGTGGGGTTAACATTTGGAACGGTTCAAATGGTTCTCTATGCAATGTATCGAAATAAAAAACCGGTTCAAGATGAGAAGCTACCAGAACACAAAGCTGTCGACATTGAAAACAACATCGAACAAAGCGTCGAAGACGAGAAGAAAAAGCAAAAGGAGGAGAAAAAACGCGATATTGAGAAAGTAGAAGTAGTAGTAAAAAACATAGAAATGAAAGAAACAAAAGAAGAAAAAGAAAAAGAGAAAAATGAAGATTCATCATCACAAAAAGAAAACAACCAAACAGAAGTTAAGGACAAGAATGACAACAATAACAACAAGTCATGA 906 0.3797 MPHSPLVFTFGILGNIASFVCFLAPLPTFYRVCKKKSTEGFQSIPYVAALFSAMLWIFYAYVKTGETLLITINAFGCVIETIYLAIFITYCPKKVRMSTLRMILLLNFGGFCTIVLLTHILAKGANRPKLLGWICVVFATSVFAAPLSIIRTVIRTKSVEFLPFPLSLLLFISAIMWLLYGIFLKDIYVTLPNVVGLTFGTVQMVLYAMYRNKKPVQDEKLPEHKAVDIENNIEQSVEDEKKKQKEEKKRDIEKVEVVVKNIEMKETKEEKEKEKNEDSSSQKENNQTEVKDKNDNNNNKS* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2410 301 Gene3D - 9 94 - -
Amo08g2410 301 PANTHER RAG1-ACTIVATING PROTEIN 1 5 278 - -
Amo08g2410 301 Coils Coil 238 284 - -
Amo08g2410 301 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 5 278 - -
Amo08g2410 301 MobiDBLite consensus disorder prediction 266 301 - -
Amo08g2410 301 Gene3D - 127 221 - -
Amo08g2410 301 Pfam Sugar efflux transporter for intercellular exchange 130 214 IPR004316 GO:0016021
Amo08g2410 301 Pfam Sugar efflux transporter for intercellular exchange 9 94 IPR004316 GO:0016021
Amo08g2410 301 SUPERFAMILY MFS general substrate transporter 7 181 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2410 Amo-Chr8 37810930 37813443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2410 3 223 Miscellaneous Gene Families AT5G23660 60.262 4.97e-98 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2410 K15382 - gmx:100791106 404.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3568 13 121292786 121294620 Amo08g2410 08 37810930 37813443 PCT
Amo03g2593 03 112440577 112442298 Amo08g2410 08 37810930 37813443 PCT
Amo08g2410 08 37810930 37813443 Amo13g3568 13 121292786 121294620 PCT
Amo08g2410 08 37810930 37813443 Amo03g2593 03 112440577 112442298 PCT