Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2593 ATGCCTCAAGTCGCTACTGAAATTTTTATCGTTGGTGTTATAGGTAACATTTGCTCCTTCATTTGCTTCTTGGCACCTTTATCCACATTTTATCGAGTTTGTAAGAAGAAAACAACGGAAGGGTTCCAGTCGATTCCATATGTGGCAGCACTGTTCAGTGCAATGCTTTGGATATTTTATGCTTACATAAAGAAGGGCGAAATACTTATCATCACCATCAACTCATTCGGTTGTTTTATAGAGACAATTTACCTTGCCATCTATCTCACCTATTGCCCCAAGAAAGCTAGGATCTTCACGTTGAAGCTGATATTCATGTTCAACTTGGGGGGAATATTCTTGGTTGTCCTTCTGACACACGTTCTAGCAAAAGAAAGAACAGCTCGTCTAGAGCTTCTTGGATGGATCTGCGTCGTCCTTTCCACCAGTGTCTTTGCAGCACCTTTAAGCATCATTAGAGTGGTAATTCGCACAAAGAGTGTGGAGTTCATGCCCTTCAATCTTTCACTGCTTCTCACAATAAGCGCAATAATGTGGATGGCATATGGCATTCTTCTCAAGGATATCTATGTTACACTTCCGAACATAGTGGGAGTGACATTCGGGACAATACAGATGGTGCTGTATTGTATATACAGGAAGAACAAGCCCGTGAGCAAGGATAATGATGAGAAGCTGCCTCAACATAACGGAGAAGTTGAAGCTACCACCCCTCAGGCCCCCATTGATATTGAGATTGGAGATCAGAAGAAGCAGCAACCAGACAACAACCCTCCTACTCCTGTGGAAGCCACTAATAATCATCAAGTGCAAGTCCAGCTGCAACAACAGAAAGTGTGA 840 0.4274 MPQVATEIFIVGVIGNICSFICFLAPLSTFYRVCKKKTTEGFQSIPYVAALFSAMLWIFYAYIKKGEILIITINSFGCFIETIYLAIYLTYCPKKARIFTLKLIFMFNLGGIFLVVLLTHVLAKERTARLELLGWICVVLSTSVFAAPLSIIRVVIRTKSVEFMPFNLSLLLTISAIMWMAYGILLKDIYVTLPNIVGVTFGTIQMVLYCIYRKNKPVSKDNDEKLPQHNGEVEATTPQAPIDIEIGDQKKQQPDNNPPTPVEATNNHQVQVQLQQQKV* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2593 279 MobiDBLite consensus disorder prediction 221 279 - -
Amo03g2593 279 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 5 239 - -
Amo03g2593 279 MobiDBLite consensus disorder prediction 251 279 - -
Amo03g2593 279 Gene3D - 6 96 - -
Amo03g2593 279 PANTHER RAG1-ACTIVATING PROTEIN 1 5 239 - -
Amo03g2593 279 Gene3D - 128 227 - -
Amo03g2593 279 Pfam Sugar efflux transporter for intercellular exchange 132 216 IPR004316 GO:0016021
Amo03g2593 279 Pfam Sugar efflux transporter for intercellular exchange 10 96 IPR004316 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2593 Amo-Chr3 112440577 112442298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2593 6 254 Miscellaneous Gene Families AT5G23660 54.980 8.44e-90 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2593 K15382 - gmx:100801430 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3568 13 121292786 121294620 Amo03g2593 03 112440577 112442298 hybridization
Amo03g2593 03 112440577 112442298 Amo08g2410 08 37810930 37813443 PCT
Amo08g2410 08 37810930 37813443 Amo03g2593 03 112440577 112442298 PCT