Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2087 ATGGGTAGGAAGGGACACCAACTATTCGACGAAAAGAATGATGGGTTTTTTTTCTCTGTTTCCAATTTGGGTTCTCAATGGAACCTCCAAGAACAACAACAAGGTTCCTATTACCACCCAGGAGGCTTGTTTGCAAGCGTTGGCCAAATGGGTACCATGGGTTTTGGTGTTCAACAACCAAATCCTTCTTCTTCAGCTGATTCTGATTCACGTGACAATGACAACGGTGGTTTGAAACTACCCTTCAATGATTTGTACGTTAAGTATGTTCAGSGTCTTGGGAAAGTTCARTTCTTTGAGGAAGGGGARGAAGGGGTTAAGGCTAAGAAGAAAAGGAGTGGCCTTAAATTGAAGGTTAGRATCAGGAACCCTTCTCTGAGGAGGCTTTTCAGTGGGGCAATTGCAGGCGCTATTTCGCGAACCGCAGTGGCACCATTGGAGACTATAAGGACTCACTTGATGGTTGGAAGCAGTGGCCATTCCACCACTGAGGTGTTCCATAATATCATGAAGACTGATGGATGGACAGGGTTGTTTAGGGGTAATTTTGTTAATGTCATTCGRGTTGCACCTAGYAAGGCTATTGAGCTATTTGCTTATGATACAGTTAACAAGAACCTATCACCAAAGCCCGGGGAACAGCCTAAAGTTCCTATTCCTGCCTCATTGATTGCAGGTGCCTGTGCCGGAGTGAGTTCAACTATATGCACATATCCTCTCGAGTTGGTCAAAACTCGACTAACTATCCAGAGAGGTGTTTACAACGGTCTACTCGATGCATTCTTGAAAATAATTCGAGAGGAGGGTCCGGCGGAACTTTATAGAGGCCTTGCCCCCAGTCTTATTGGAGTCATTCCGTATGCTGCCACCAATTACTTTGCCTATGACACCTTACGGAAAGCATACCGGAAGATTTTTAAGCAAGAAAAGATTGGTAACATTGAAACCCTTTTGATTGGATCGGCAGCCGGTGCTATCTCAAGCAGTGCAACGTTTCCACTTGAGGTGGCTCGCAAGCATATGCAAGTGGGAGCTCTGAGTGGAAGACAAGTTTACAAAAATGTGATTCATGCCCTTGCAAGCATACTAGAACACGAAGGGATTCCCGGTTTATATAGAGGGCTCGGGCCTAGTTGCATGAAATTAGTGCCGGCTGCCGGAATCTCTTTCATGTGCTATGAAGCATGCAAGAGGATATTGGTAGACGACGATGAAGAGGCATAA 1224 0.451 MGRKGHQLFDEKNDGFFFSVSNLGSQWNLQEQQQGSYYHPGGLFASVGQMGTMGFGVQQPNPSSSADSDSRDNDNGGLKLPFNDLYVKYVQXLGKVQFFEEGEEGVKAKKKRSGLKLKVRIRNPSLRRLFSGAIAGAISRTAVAPLETIRTHLMVGSSGHSTTEVFHNIMKTDGWTGLFRGNFVNVIRVAPSKAIELFAYDTVNKNLSPKPGEQPKVPIPASLIAGACAGVSSTICTYPLELVKTRLTIQRGVYNGLLDAFLKIIREEGPAELYRGLAPSLIGVIPYAATNYFAYDTLRKAYRKIFKQEKIGNIETLLIGSAAGAISSSATFPLEVARKHMQVGALSGRQVYKNVIHALASILEHEGIPGLYRGLGPSCMKLVPAAGISFMCYEACKRILVDDDEEA* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2087 407 MobiDBLite consensus disorder prediction 53 77 - -
Amo08g2087 407 PANTHER SOLUTE CARRIER FAMILY 25 31 405 - -
Amo08g2087 407 Pfam Mitochondrial carrier protein 217 304 IPR018108 -
Amo08g2087 407 Pfam Mitochondrial carrier protein 125 207 IPR018108 -
Amo08g2087 407 Pfam Mitochondrial carrier protein 311 402 IPR018108 -
Amo08g2087 407 ProSiteProfiles Solute carrier (Solcar) repeat profile. 311 399 IPR018108 -
Amo08g2087 407 ProSiteProfiles Solute carrier (Solcar) repeat profile. 217 301 IPR018108 -
Amo08g2087 407 MobiDBLite consensus disorder prediction 53 71 - -
Amo08g2087 407 SUPERFAMILY Mitochondrial carrier 124 395 IPR023395 -
Amo08g2087 407 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 206 IPR018108 -
Amo08g2087 407 PRINTS Mitochondrial carrier protein signature 141 155 IPR002067 GO:0055085
Amo08g2087 407 PRINTS Mitochondrial carrier protein signature 128 141 IPR002067 GO:0055085
Amo08g2087 407 PRINTS Mitochondrial carrier protein signature 232 250 IPR002067 GO:0055085
Amo08g2087 407 PRINTS Mitochondrial carrier protein signature 181 201 IPR002067 GO:0055085
Amo08g2087 407 PRINTS Mitochondrial carrier protein signature 274 292 IPR002067 GO:0055085
Amo08g2087 407 PRINTS Mitochondrial carrier protein signature 320 342 IPR002067 GO:0055085
Amo08g2087 407 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 31 405 - -
Amo08g2087 407 Gene3D Mitochondrial carrier domain 121 405 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2087 Amo-Chr8 33643724 33647244 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2087 1 407 Organic Solute Cotransporters AT4G32400 67.482 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2087 K14684 - zju:107406946 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g2961 06 95721829 95724472 Amo08g2087 08 33643724 33647244 PCT
Amo08g2087 08 33643724 33647244 Amo06g2961 06 95721829 95724472 PCT