Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2043 ATGACCACTCTATCTGAGGCCTATAGAGAGCACCCTCTTCACCTTAGACACATTATCCCTTTAGACTTTTCTTCAATTTCAACCTTACCTGATTCCCACGCATGGTTTCATGATCATGATCGCGATTCTGATGAGGAACAGAATCGCGATCATGATCATGATGATGATGGGGGGATTCCATCCATACCCATCATCGATCTCGCGGATCCGAATGCAATGGAGCTCATGGGGATGGCATGTGAGAATTGGGGTGCCTTCCAATTGAAGAACCATGGTGTTTCAATGAGTGATATTGAAGAGGTTGAGAAAGAAGCTAAGAGGTTCTTTGATCTTCCAACGGATCAAAAATTGAAGGCATTAAGATCACCTGGTGGGGCCACAGGGTATGGAAGGGCAAGAATTTCACCATTTTTTCCAAAGTTCATGTGGCATGAAGGTTTCACCATCATGGGTTCTCCTTCTTCAGATGCTATGAAGATTTGGCCTAATGATTATCAAACGTTTTGTGATAAGATAGAGATATTTCAAAAGCAAATGAAGGCACTAGCTGAGAAACTAACAAGAATGATATTCAACTTGTTAGAAATTCCAGAGCAAGAAAAAAAGTGGGTTGGTTCAACCAACTCGAATAACGGAGCCATTCAACTAAATTTCTACCCGGTTTGTCCTGAGCCGAACCGGGCCATGGGTTTAGCCCCTCACACGGACACATCCCTATTCACAATCCTCCACCAAAACCAAACCAATGGCCTCCAAATCTTTAAAGAAGGGAAGGGTTGGGTTCATGTAAACCCTAACCCTAATTCCCTTATTGTTCACACCGGTGATTTCTTGCACATTATTTCCAATGCAAGATTTAAATGTGCACTTCACCGTGTGGTTGTGAAGAGAACAAAAAAACGTTACTCTTTGGCTTATTTCCATAATCCACCATTGGATTATGTGATTTCTCCTTTGGTGGTGAATTCTAATGATGCAAGATTTCGTAGGGTTAGTGTGAAGGAGTATTTTGGGATTAAGGCAAAGAATTTTGGTGAAGCACTTTCTTTGATTAGTACTAGCTAG 1065 0.4169 MTTLSEAYREHPLHLRHIIPLDFSSISTLPDSHAWFHDHDRDSDEEQNRDHDHDDDGGIPSIPIIDLADPNAMELMGMACENWGAFQLKNHGVSMSDIEEVEKEAKRFFDLPTDQKLKALRSPGGATGYGRARISPFFPKFMWHEGFTIMGSPSSDAMKIWPNDYQTFCDKIEIFQKQMKALAEKLTRMIFNLLEIPEQEKKWVGSTNSNNGAIQLNFYPVCPEPNRAMGLAPHTDTSLFTILHQNQTNGLQIFKEGKGWVHVNPNPNSLIVHTGDFLHIISNARFKCALHRVVVKRTKKRYSLAYFHNPPLDYVISPLVVNSNDARFRRVSVKEYFGIKAKNFGEALSLISTS* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2043 354 MobiDBLite consensus disorder prediction 37 61 - -
Amo08g2043 354 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 209 310 IPR005123 -
Amo08g2043 354 Pfam non-haem dioxygenase in morphine synthesis N-terminal 62 162 IPR026992 -
Amo08g2043 354 Pfam 2OG-Fe(II) oxygenase superfamily 214 310 IPR044861 -
Amo08g2043 354 Gene3D - 18 344 IPR027443 -
Amo08g2043 354 MobiDBLite consensus disorder prediction 37 59 - -
Amo08g2043 354 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 11 347 - -
Amo08g2043 354 SUPERFAMILY Clavaminate synthase-like 17 344 - -
Amo08g2043 354 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 11 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2043 Amo-Chr8 32998176 33002176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2043 62 336 Glycosyltransferase AT5G59530 28.912 5.77e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2043 K04124 - gmx:100818754 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g2043 08 32998176 33002176 Amo06g3007 06 96458317 96460705 PCT