Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g3007 AAAATGGCGACAATCGAGTCTTCTGGTGTTGAAACCAAAACCCTCCCAATCCAACTTCCCCTTGACTTTTCTTCAATTCAATCCGTGCCTGAATCTCATGCATGGGCTGAATCAAATGAAGATAAAGTTGAAAACAATGGAGATGGGTCAATAGTGTTACCCATCATTGACCTGAATGATCCAAATGCCATGGAAATGATAGGGTATGCATGTGAGAATTGGGGTGCTTTCCAATTGAAGAACCATGGCATATCGAAGAGTGTTATTGAAGAGCTTGAAGTTGAGACAAAGAGGCTCTTTGATCTTCCAAAAGAGCAAAAGTTGAAGGCTCTTAGATCTCGTGATTATCCAACAGGATATGGAACTTTTTGGATTACACCTTTCTTCCAACAACGTATGTGGCAAGAAGGATTCACCATCATTGGTTCTGCTGTTCAAGATGCCAAAAAGATTTGGCCTAATGACTATCAACCCTTTTGTGATGCGATGAAGAAGTTCGAAGACGAATCAAGGGTGTTAATAGAGAAATTGATACACCTAAGCTTCAAATTCTTGGGAATTTCTGAAGAAGAAGAAAAGAATTGGGTTGGCCCWAAWAATCATGCTGGTGCAATTCAATTGAATTCATACCCTATTTGTCCCAAACCTGAAAACGCCATGGGCATAGCTCCACACACAGACACTTCAATCTTCACACTCCTTCACCAAAGCCAAAGCAGTGGCCTTCACATCTTCAAGGATGGTTCAGGTTGGTTCACTGTGCCACTTGTACCTGACACCATTATCATCAACACCGGCGATGTTCTTCACATGTTATCCAACGCAAGATTCAAATCAGCACTTCACAAAGTTTCAGTGAACAACGTTAAGCATAGGTACTCTATGGTCTATTTTTATCGGCCCACCATGGATCAAGTAGTTTCTCCTTTGGTTCCGAATAATAACTCTGATGAGGAACCTCGTTTTCGTGCGTTGACTTTCAAGGAGTATGTTGGAATTAAGGACAAGTATCTTGACAAAGCCTTGTCAATTGTTAGCGTCAAAGAAGATTAA 1053 0.4093 KMATIESSGVETKTLPIQLPLDFSSIQSVPESHAWAESNEDKVENNGDGSIVLPIIDLNDPNAMEMIGYACENWGAFQLKNHGISKSVIEELEVETKRLFDLPKEQKLKALRSRDYPTGYGTFWITPFFQQRMWQEGFTIIGSAVQDAKKIWPNDYQPFCDAMKKFEDESRVLIEKLIHLSFKFLGISEEEEKNWVGPXNHAGAIQLNSYPICPKPENAMGIAPHTDTSIFTLLHQSQSSGLHIFKDGSGWFTVPLVPDTIIINTGDVLHMLSNARFKSALHKVSVNNVKHRYSMVYFYRPTMDQVVSPLVPNNNSDEEPRFRALTFKEYVGIKDKYLDKALSIVSVKED* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g3007 350 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 20 340 - -
Amo06g3007 350 SUPERFAMILY Clavaminate synthase-like 20 334 - -
Amo06g3007 350 Pfam 2OG-Fe(II) oxygenase superfamily 206 301 IPR044861 -
Amo06g3007 350 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 20 340 - -
Amo06g3007 350 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 198 301 IPR005123 -
Amo06g3007 350 Gene3D - 20 337 IPR027443 -
Amo06g3007 350 Pfam non-haem dioxygenase in morphine synthesis N-terminal 53 152 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g3007 Amo-Chr6 96458317 96460705 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g3007 53 342 Glycosyltransferase AT5G59530 26.537 7.88e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g3007 K04124 - gmx:100808546 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g2043 08 32998176 33002176 Amo06g3007 06 96458317 96460705 PCT