Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2010 ATGGCTGATGATAAAGCAGTTGGGGAAGATGAAAAGAAAGAGCCAAGTACTACTGCCACCAAAAATGTGAGACAGAAGCGCAGAGGGTTCCTTTCCGGAATTTGGAATGGACTATTTAGGTTACATGGGGATGATTTTGAGAAGAGGCTCCAATACATATCTAAAGAAGAGGCTGCAGTTCTTTCTAGAATGAAAAGGAGGTCACGATCCTGGAGGCAGATATCTTGGAATGTAATTGTATTTTCTGTTATATTAGAGGTCATTGCTGTAGTTTATGCTATCATGACAACAAGATCTGTGGATATGAATTGGAAGATGAGGGCAGTCCGGGTTTCGCCAATGTTTCTTTTGCCTGTATTAGCATCTGCAGCATATTCAACCTTTGTTAGCTTTGTGAGGATTTGTGATCGCAGGGACGAGAAAATTCTTGTAAGGCTTAGAGAAGAAAGGCAAGCAAAAATTGATGAGCTGAAGGAAAAGACAAATTATTACACTACACAACAGCTCATTCAGAGATATGACCCAGATCCAGCCGCAAAAGCAGCTGCGGCAACTGTTTTGGCATCTAAGTTGGGTGCAGAATCAGGTTTGAGGGTGTATATGGGAGATGAATTAAATCCCAGTGCTACAATGGGGAGGAGCAATGATGTTGAACTTGTACAGTCAAGTGGACTTCGAAATCGAAAACAACCTCACGCTAGATCCTCTAGTTCAGAGGCAACTACTCCATTTAATCCTGATCAACAACATTTAGTTGGAGGATCCGGGGGACTTGATCAAACTCAGACTTCTGAGTATAATCATCTTGTTGTTGAGCATCACCAACCACAAAGTTCAACCTCACAAGATGGAGGATGGCTTGCTAAAATTGCAGCGTTGCTTGTGGGCGAGGATCCTACCCAGTCTTATGCTCTCATATGTGGCAACTGCCATATGCATAATGGTCTAGCTCGGAAGGAGGATTTCCCATATGTAACATACTATTGCCCCCACTGTCATGCCCTGAATCAACCAAAGCAATTAGATGGCAATATCTCCCGGGCATCCCCAAGAATGGGGTCTCCGAAAGCTTATGAAAGTGAGGCAGTAAAATATGCTAGCGGTTCTGCAGCTGAGAGCATGCTACTCACAAGCAATAACCCCGTAGATGTTATTGCTTCTGCAACTGAGAGCACAATCACAAGCAATAGCCCCGTTAATGCTAGCCCTGAGATTGAGGAAGTATCAGAAAGGACGAGTTCGGAAGATAAAGCTGATTAA 1260 0.4341 MADDKAVGEDEKKEPSTTATKNVRQKRRGFLSGIWNGLFRLHGDDFEKRLQYISKEEAAVLSRMKRRSRSWRQISWNVIVFSVILEVIAVVYAIMTTRSVDMNWKMRAVRVSPMFLLPVLASAAYSTFVSFVRICDRRDEKILVRLREERQAKIDELKEKTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGAESGLRVYMGDELNPSATMGRSNDVELVQSSGLRNRKQPHARSSSSEATTPFNPDQQHLVGGSGGLDQTQTSEYNHLVVEHHQPQSSTSQDGGWLAKIAALLVGEDPTQSYALICGNCHMHNGLARKEDFPYVTYYCPHCHALNQPKQLDGNISRASPRMGSPKAYESEAVKYASGSAAESMLLTSNNPVDVIASATESTITSNSPVNASPEIEEVSERTSSEDKAD* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2010 419 MobiDBLite consensus disorder prediction 389 407 - -
Amo08g2010 419 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 13 416 IPR040115 GO:0071786
Amo08g2010 419 MobiDBLite consensus disorder prediction 389 419 - -
Amo08g2010 419 MobiDBLite consensus disorder prediction 1 21 - -
Amo08g2010 419 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 286 336 IPR019273 -
Amo08g2010 419 PANTHER INTEGRAL MEMBRANE METAL-BINDING FAMILY PROTEIN (DUF2296) 13 416 - -
Amo08g2010 419 MobiDBLite consensus disorder prediction 224 261 - -
Amo08g2010 419 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2010 Amo-Chr8 32427997 32431127 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2010 K23292 - gmx:100816305 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g3032 06 96790013 96794734 Amo08g2010 08 32427997 32431127 PCT
Amo08g2010 08 32427997 32431127 Amo06g3032 06 96790013 96794734 PCT