Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g3032 ATGGGTGAGGAGAATAAGGTAGTTGGAGAAGGTGAGAAGAAGAAAGAGGAAAGTGTTGGTGCCACTGCTGTTGTTGGTGATGGAGAGGAGGAAAAGAATAATAAGAAGAAGAAGAGTAAGAAGCAGGGGTTAATTTCTCGAATTTGGAACGGGATTTTCAGAAGACGTAGCGATGATTTCGAGAAGAGGCTGCAGTATATTTCCAAAGAGGAAGCTGCGGTTATGGCCAGGGTCAATCGGAGAAACCGGTCGTGGCGGAGAACTTCGCGCCAGATCATCATAATTTCTGTTATATTTGAGGCCGTTGCTGTAGGTTTTGCAATCATGACAACTAGATCAATGGATATGAATTGGAAGATGAGAGCAATCCGAGTTTTGCCAATGTTTCTTTTGCCTGCCTTGTCATCTGCTGTTTATTCAACGTATGTTAGCTTCACAAGGATGCGTGATCGCAAGGACCAGAAAATTCTTGTAAAGCTTCGGGCTGAAAGGCAGGCAAAAATTGATGAGCTCAAAGAAAAGACAAATTATTACATTACTCAACAACTCATTCAGAGATATGACACAGATCCAGCAGCAAAGGCAGCTGCTGCAACTGTTTTGGCATCCAAGTTGGGTGCAGATTCTGGCTTGAAAGTATACGTGGGAGATGAATCTAACTCTGCTGCTCCAACAGGGCAGAGCATTGATGCTGATCCTGCAAGGTCTAGTGGACTTAGAAATCGGAAAACAGTGCATTCTAGATCCATTAGTTCTGGGACATCTACTCCAAATGTTCCTGATCAACAACTAGTTGGTGCTGCCGGAACTGATCAAACTCATACTTCTGAGCACAATCAGCTTGTAGTTGTTGAACATCACCAACCTCAAAGTTCAACATCACAAGATGGGTGGATTGCTAGAATCGCAGCATTGCTTGTAGGTGAGGATCCAACACAGTCATATGCGCTCATATGCGGTAACTGCCATATGCATAATGGTCTTGCTCGGAAGGAGGATTTCCCATTTATTACTTACTATTGCCCACACTGTCGCGCCTTAAACAAACCAAAGCAATCAGATGAGCGTGTCTCTAGTGGTAACTCCCCAAATATGAGGTTTCCAAACACAGATGATGGTGAAGCAGTAATTAAAACTGTTAGTGCTTCTGCTGCTGACAGCATAATCAAAAGCAATAATCCCTTAGATACTGCTACCCCTGAGATTGAAGAAGTATCCGAAGTGGCTAGTTCAGGGGAGAAAAATAGTTAA 1251 0.4333 MGEENKVVGEGEKKKEESVGATAVVGDGEEEKNNKKKKSKKQGLISRIWNGIFRRRSDDFEKRLQYISKEEAAVMARVNRRNRSWRRTSRQIIIISVIFEAVAVGFAIMTTRSMDMNWKMRAIRVLPMFLLPALSSAVYSTYVSFTRMRDRKDQKILVKLRAERQAKIDELKEKTNYYITQQLIQRYDTDPAAKAAAATVLASKLGADSGLKVYVGDESNSAAPTGQSIDADPARSSGLRNRKTVHSRSISSGTSTPNVPDQQLVGAAGTDQTHTSEHNQLVVVEHHQPQSSTSQDGWIARIAALLVGEDPTQSYALICGNCHMHNGLARKEDFPFITYYCPHCRALNKPKQSDERVSSGNSPNMRFPNTDDGEAVIKTVSASAADSIIKSNNPLDTATPEIEEVSEVASSGEKNS* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g3032 416 MobiDBLite consensus disorder prediction 390 416 - -
Amo06g3032 416 MobiDBLite consensus disorder prediction 1 40 - -
Amo06g3032 416 MobiDBLite consensus disorder prediction 243 275 - -
Amo06g3032 416 MobiDBLite consensus disorder prediction 220 234 - -
Amo06g3032 416 MobiDBLite consensus disorder prediction 1 20 - -
Amo06g3032 416 MobiDBLite consensus disorder prediction 218 275 - -
Amo06g3032 416 MobiDBLite consensus disorder prediction 353 368 - -
Amo06g3032 416 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 298 348 IPR019273 -
Amo06g3032 416 MobiDBLite consensus disorder prediction 350 372 - -
Amo06g3032 416 PANTHER INTEGRAL MEMBRANE METAL-BINDING FAMILY PROTEIN (DUF2296) 26 413 - -
Amo06g3032 416 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 26 413 IPR040115 GO:0071786
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g3032 Amo-Chr6 96790013 96794734 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g3032 K23292 - gmx:100815496 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g3032 06 96790013 96794734 Amo08g2010 08 32427997 32431127 PCT
Amo08g2010 08 32427997 32431127 Amo06g3032 06 96790013 96794734 PCT