Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1566 ATGAGGGGTCCTTTGGGTGCAGTCATAGGAAGATACTCATCAAGTGATGGAACCACCCCAGTTGGTGGGATCATAAGGCACAACAGAAAATGCAGCGACATTGCTGTTCTTGTTATCTTAATAGCATTCTGGATTTCCATGATTGTAAACTCTAGCTTTGGTTTCAACCAAGGGAACCCTTTGAGGCTTACTTATGGGCTGGATTATAAAGGAAATGTGTGTGGGGACAAGCATGCAGGGCTTCACGAAGTTGAGCTATTGTACTGGCTAAATCCTAATCAGGTATATCAAAGTGGATTGAAGGATAGCAAGCTAAAACTGGTCGACGCTCGCAGCATATGCTTGTTGGACTGCCCTGTACCTTCTGAAGATTCACTTAATTGGGTGTGTGATTATCCCGAAGGAGACATTCGTCTTAGTATGGATGATTGGATTGATAGCAACTATAATTATTATGAGTACCTTACACCGGAAATGAGAAACTCCTCTCTTCAACTTCAGGGCCCTTGTTATCCTGTCATATTTCCTAGTGTAAATGTTTACTGGACTTGCCAATTCATTGCTCGTGCATCAAATGTGTCATTAAACCATTGGCAGCAGATGGGTGGAGTTAGCATCAATGAAGACATTGTTATTGATAAGTCTATTCACAAGTATATCAACTCTCGGTCAGCCGTCTTAAAGAGATACATGGCTGACATAGGAAAGTCATGGCCTGTGCTGATTGTTTGTGGGGGGATTATACCTCTGTTTCTATCCGTGATTTGGCTGCTGATGATTCGGTATTTTGTCACTGCAATGCCTTGGGTGACAGTGGTTTTCTTTAATCTCCTAATGGTATCAGTCACAATGTTCTACTACCTGAAAGTTGGATGGATAGGAAATAATGCTATTTCCCCCATCATTGGCGAGCACGATCCTTACATTCATGTATCTGGGAGGGAGCTGACTCATCTACGCATTGGCACTATAATGATGACATTTATAACAATTGTTGCAATTCTGACATCAATTGCTATTGTCCGACGCATCCTTATAGGAACTTCTGTTCTTAAGGTTGCTGCAAAAGTGATAGGAGAAGTTCGAGCACTCATCACTTTTCCGGTCATACCGTATTGTATTCTTGCAGTGTTCTACATGTTCTGGATTTCTGCTGCTCTCCATTTGTTCAGCTCTGGTCAGGTTGTTCAAAACAACTGCAATTCTAATTGCTGTGCATATGATCTCCTTGAGAAAAAGGTGAACTGTGATCGTTGTTGCGGATATAGCATTCATTACACACCACATATAGGAATCGCCATCCTTTTTCATCTATTTGGGTGTTACTGGGCCACACAATTCTTCATAGCATGCTCATCAACAGTGATTGCTGGATCTGTTGCTTCTTATTATTGGGCACGTGGTGAAAATTCTCAAGAAATCCCTCTTCTGTCAGTCATTTCCTCCATGAAGAGGCTTATGCGTTACAATCTGGGTTCTGTGGCTCTTGGCTCTCTGACTGTATCATTTGTAGAGTCGATCCGACTTTTGCTTGAATCCATGCGTCGCAAACTAAAAGTCTCCAGTTATGAGCCCGATAACTGGATTGGCAAGGCTGCATACCGTACTTCTCAATTTTTTCTAAGGTGTATTGGATGGATCATCAAATCAGTGAATCGAAATGCATACATAATTATTGCTATAACAGGTGAAAGTTTCTTCAGATCTTCTGCTATTGCAACAGAATTGATTATGAATAACATCCTGCGGATCGGACGTGTCAATGTGATTGGAGATGTTATTTTGTTCCTTGGAAAACTATGTGTTAGTCTCTCAAGTGCTGTTTTTGCATTCCTTATGTTGGATACACACAAGTATAGAGCTGCACATAACAAGATCACATCCCCACTCTTGCCTGTTCTGGTTTGCTGGATTATTGGGTACATTGTCGCAACGCTTTTCTTTGGAGTCGTTGAGATGTCAATTGATACCATCATTCTCTCTTACTGTCAGGATTCAGAAGAGAATGGAACAGCACAGTATGCTCCACCCCTTCTCATGGAAACTCTCAACAATAACCAAAATGAGACGCAAAGGCTTACACAAGGATCCCAATGA 2097 0.4158 MRGPLGAVIGRYSSSDGTTPVGGIIRHNRKCSDIAVLVILIAFWISMIVNSSFGFNQGNPLRLTYGLDYKGNVCGDKHAGLHEVELLYWLNPNQVYQSGLKDSKLKLVDARSICLLDCPVPSEDSLNWVCDYPEGDIRLSMDDWIDSNYNYYEYLTPEMRNSSLQLQGPCYPVIFPSVNVYWTCQFIARASNVSLNHWQQMGGVSINEDIVIDKSIHKYINSRSAVLKRYMADIGKSWPVLIVCGGIIPLFLSVIWLLMIRYFVTAMPWVTVVFFNLLMVSVTMFYYLKVGWIGNNAISPIIGEHDPYIHVSGRELTHLRIGTIMMTFITIVAILTSIAIVRRILIGTSVLKVAAKVIGEVRALITFPVIPYCILAVFYMFWISAALHLFSSGQVVQNNCNSNCCAYDLLEKKVNCDRCCGYSIHYTPHIGIAILFHLFGCYWATQFFIACSSTVIAGSVASYYWARGENSQEIPLLSVISSMKRLMRYNLGSVALGSLTVSFVESIRLLLESMRRKLKVSSYEPDNWIGKAAYRTSQFFLRCIGWIIKSVNRNAYIIIAITGESFFRSSAIATELIMNNILRIGRVNVIGDVILFLGKLCVSLSSAVFAFLMLDTHKYRAAHNKITSPLLPVLVCWIIGYIVATLFFGVVEMSIDTIILSYCQDSEENGTAQYAPPLLMETLNNNQNETQRLTQGSQ* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1566 698 Pfam Plasma-membrane choline transporter 324 667 IPR007603 GO:0022857|GO:0055085
Amo08g1566 698 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 3 695 - -
Amo08g1566 698 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 3 695 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1566 Amo-Chr8 25753839 25758415 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1566 K15377 - zju:107432434 1197.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1539 18 30143450 30148085 Amo08g1566 08 25753839 25758415 hybridization