Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1443 ATGTGCCTCTCGCTCTCTCTATATATACCCTCTTTTCCTCTCATCCTCTTCACCCCTTCACTCCCACCATTAACAAACATAAACACTTTCATTCTCGTCATTTTCTTCCTTATCCTTTTCTTTCTATTTTCTTCCCACTTAATAAACAACGAACTGGTTACCATGCCTGAGGCACCAAAAGAGTATGACCTGGCGGGTGAGAACAAGAGGGTCCTGGACTTCATCGAGTATGTCACTGCAAACGCCGACGTTGTGCAGAAAGACATCCTCGATGAGATCCTGTCCCGTAATGTCGGTGTAGAGTATCTACGCCGGCATGGCCTTGAAGGCCGCACGGACCGGGACACCTTCAAGAAGCTTCTCCCCGTCATAACTTACGAGGACATCCAACAAGATGTTCTTCGCATAGCCAATGGAGACACTTCTCCAATACTCACCTCAAAGCCTATCTCAGAGTTTCTCACTAGCTCTGGGACATCAGGAGGAGAGAGAAAGCTGATGCCAACAATTGAAGAAGAGCTAGGAAGAAGGTGCTTGCTTTATAGCCTATTAATGCCAATAATGAGTCAATTTGTGCCTGACCTAGAAAAGGGCAAAGGCATGTACCTTATGTTCATAAAATCCGAGTCTTGGACACCTGGGGGGATAGTGGCTCGGCCAGTCCTCACAAGCTACTACAAGAGCCCTTATTTTAAGGACAGACCCTATGACCCATACACTAACTACACAAGCCCAAATGAAACCGTCCTTTGCCCTGATTCCTACCAAAGCATGTACTCACAACTTCTTTGTGGCCTTTGCCAAAACAAAGAAGTTTTGAGGGTTGGAGCTGTTTTTGCTTCCGCTTTTATTAGGGCCATAAGGTTTCTTGAGAAACATTGGGTCCTACTTTGTAACGACATAAGGACCGGATCTCTAAATCCCAATATCATCTCTGACCAGACAGTCAGAGACGCCGTGAAAAAGATTCTTGATAAACCCAATCCGTATCTTGCGGATTTTATCGAGAGTGAGTGTAGTAAGAGTTCATGGCAAGGGATTATCACGAGATTGTGGCCCAACACAAAGTATGTGGATGTTATTGTGACAGGAACTATGTCACAATATATACCAACATTGGATTACTATAGCAATGGGCTACCACTTGTGTGTACCATGTATGCATCAAGTGAGTGTTACTTTGGTGTGAATCTAAATCCTCTTTGCAAACCAAGTGAGGTGTCCTACACCCTCATCCCTTCAATGTGCTACTATGAGTTTTTGCCGGTTAACCGGAGCGACGAGGTCACCGGTTCGCTTCACATGCCAAAATCGCTCAATGAGAAGGAGCAACAGGAGCTGGTGGAGCTTGTGGATGTTAAGCTTGGCCAAGAATATGAGCTTGTGGTCACAACTTTTGCCGGCCTCTATAGGTATAGAGTGGGTGATGTCCTAAGGGTGTCGGGATTCAAGAACAAGGCGCCACAATTCAACTTCGTCTGCCGGAAAAATGTTGTCCTAAGCATAGATTCCGACAAGACCGATGAGACGGAGCTCCAAAATGCCATGAAAAATGCCGTGACACACCTCCTCCCCTTCGATGCGACCGTGGTCGAATACACCAGTTATGCGGACACCACAACCATCCCGGGCCACTATGTGCTCTATTGGGAACTCACTCTAAACGGTGCGACACCAATCCCACCGTGCGTGTACGAGGATTGCTGTCTTACCGTAGAGGAGTCCCTCAACAGTGTGTACCGGCAAGGACGTGTGTCCGACAAGTCGATTGGGCCACTTGAAATAAGGATTGTGGAGCAAGGAACCTTTGATAAGCTCATGGACTATGCCATAAGCTTAGGTGCATCAATTAACCAATATAAGGCACCTAGGTGTGTTAAGTTTCCACCTGTGCTGGAGCTATTGAACTCAAGGGTGGTTGAAAGGTTCTTTAGCCCAAAATGTCCAAAATGGGTCCCCGGACACAAGCAATGGAGCAATGGTCAGAACTGA 1992 0.4659 MCLSLSLYIPSFPLILFTPSLPPLTNINTFILVIFFLILFFLFSSHLINNELVTMPEAPKEYDLAGENKRVLDFIEYVTANADVVQKDILDEILSRNVGVEYLRRHGLEGRTDRDTFKKLLPVITYEDIQQDVLRIANGDTSPILTSKPISEFLTSSGTSGGERKLMPTIEEELGRRCLLYSLLMPIMSQFVPDLEKGKGMYLMFIKSESWTPGGIVARPVLTSYYKSPYFKDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEVLRVGAVFASAFIRAIRFLEKHWVLLCNDIRTGSLNPNIISDQTVRDAVKKILDKPNPYLADFIESECSKSSWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLIPSMCYYEFLPVNRSDEVTGSLHMPKSLNEKEQQELVELVDVKLGQEYELVVTTFAGLYRYRVGDVLRVSGFKNKAPQFNFVCRKNVVLSIDSDKTDETELQNAMKNAVTHLLPFDATVVEYTSYADTTTIPGHYVLYWELTLNGATPIPPCVYEDCCLTVEESLNSVYRQGRVSDKSIGPLEIRIVEQGTFDKLMDYAISLGASINQYKAPRCVKFPPVLELLNSRVVERFFSPKCPKWVPGHKQWSNGQN* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1443 663 PANTHER - 59 659 - -
Amo08g1443 663 Pfam GH3 auxin-responsive promoter 75 627 IPR004993 -
Amo08g1443 663 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 59 659 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1443 Amo-Chr8 23490769 23494212 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1443 63 645 EF-hand Containing Proteins AT1G23160 48.731 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1443 K14487 - gmx:100791987 1078.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1296 18 23137414 23140852 Amo08g1443 08 23490769 23494212 hybridization