Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0848 ATGAAGCAGCATGTCCTAAACATTGGAAGTGATGATGCCACGGTTACAGTGGCAGTTGCGATGTTATCGTTGCTGTGCACATGTGGAGCAATAACACTAACCCCCAGCGCTAACGGTAACAGCAATCTTCACCCGTTGATCCTAATACCTGGCGCCGGAGGGAACCAACTAGAAGCTAAGTTGACCCAAGACTACAAAGCCTCTAGCTTCGTTTGCAACTCCTGGTACCCTCTTTTCAAGAAAAAGAATGGTTGGTTCAGACTCTGGTTCGATTCCTCTGTCCTCCTTTCTCCTTTCACCAAATGCTTCGCTGACCGCATGATGCTTCACTATAATCAAGACCGAGATGATTACTTTAATACCCCTGGAGTTCTCACCCGTGTCCCTCACTTTGGTTCCACCTCCTCCCTTCTTTATCTCAATCCTCGTCTTAAGTATGTGACGGAATATATGGCTTCCCTGGTAAATTCATTAGAAAAGCTTGGTTACATTGAAGGTGAAACACTGTTCGGAGCACCCTATGATTTTCGTTATGGTCTTGCAGGCGAAGGGCACCCATGTGAAGTGGGATCAAAGTTCCTTGAAGATCTCAAGAACTTGATAGAAGAAGCAAGCGCTTCAAACGGTGGGAAGGAAGTGATTCTTGTGTCCCACAGCTTAGGGGGTCTATTCGCCTTGGAACTCCTTAACCGAAACGACCCTTCATGGAGCAGGAAATTCATCAAACACTTGGTGGCACTTTCTGCACCATGGGGTGGTGCAATGGACGAAATGCTCACTTTTGCATCTGGCAACACTCTTGGTGTTCCCTTGGTGGATCCATTGATAGTTAGACCTCAGCAGAGAAGCTCCGAGAGTAACTTATGGCTTTTGCCTAATCCCAAAGTATATGGTCATCATCAAAAGTTGCTCATCACTGAAAATAGAAGCTATTCAGCACATGACATGCCTGATTTTCTCATAGATATTGGTTTTCTGGAAGGGGTTTATCCTTATAAAACACGCATTTTGCCGTTAATAGAGAACCTTAAAGCACCGGAACAAGTTCCTATTACTTGTGTTATAGGGAGTGGGGTCAGAACCCCGGAGATTTTGTTTTACAGGAATGGTGATTTTGATGAAGGGCCAGAAATTTTGTATGGGGATGGTGATGGAACGGTGAACATGGTGAGCTTGCTGGCGCTTCAGTCATTAGTGGGAGAAGACAATAAAAACCAAAGCATCAAAGTGATTAAGATTGATGGTGTGTCTCATGTTTCAATACTAAAAGATGAAGTTGCACTTGAACAAATAATTGCTGAGATTAGTAGAATTAATTCTCATCACTCACATACTGCTTTTGGCAACATTTTTGTAGGTAGATAG 1365 0.4381 MKQHVLNIGSDDATVTVAVAMLSLLCTCGAITLTPSANGNSNLHPLILIPGAGGNQLEAKLTQDYKASSFVCNSWYPLFKKKNGWFRLWFDSSVLLSPFTKCFADRMMLHYNQDRDDYFNTPGVLTRVPHFGSTSSLLYLNPRLKYVTEYMASLVNSLEKLGYIEGETLFGAPYDFRYGLAGEGHPCEVGSKFLEDLKNLIEEASASNGGKEVILVSHSLGGLFALELLNRNDPSWSRKFIKHLVALSAPWGGAMDEMLTFASGNTLGVPLVDPLIVRPQQRSSESNLWLLPNPKVYGHHQKLLITENRSYSAHDMPDFLIDIGFLEGVYPYKTRILPLIENLKAPEQVPITCVIGSGVRTPEILFYRNGDFDEGPEILYGDGDGTVNMVSLLALQSLVGEDNKNQSIKVIKIDGVSHVSILKDEVALEQIIAEISRINSHHSHTAFGNIFVGR* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0848 454 PANTHER LECITHIN:CHOLESTEROL ACYLTRANSFERASE FAMILY PROTEIN, EXPRESSED 25 438 - -
Amo08g0848 454 Gene3D alpha/beta hydrolase 371 437 IPR029058 -
Amo08g0848 454 Gene3D alpha/beta hydrolase 93 296 IPR029058 -
Amo08g0848 454 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 25 438 - -
Amo08g0848 454 Pfam Lecithin:cholesterol acyltransferase 86 293 IPR003386 GO:0006629|GO:0008374
Amo08g0848 454 SUPERFAMILY alpha/beta-Hydrolases 39 436 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0848 Amo-Chr8 14662581 14664945 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0848 7 439 Acyl Lipid Metabolism Gene Families AT1G27480 58.257 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0848 - - aip:107606353 918.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0848 08 14662581 14664945 Amo17g2889 17 131015991 131018791 hybridization