Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0774 ATGATGAGTAGTGTGGATCATAGAAACAGTAGTACCGTCTATAAAGGCCATGAGAAAATATCAATATCACAAGAAGAGCAAGAAAAGATCAATGAGGTGAGAAGGTTGATAGGTCCATTATCAGCAAAGGCATCTGTTTATTGCAGTGATTTATCCATATCAAGGTATTTGAGATCCAAAAACTGGAATGTGAAGAAGGCAACACAAATGCTGCAGCGGAGCCTGAAATGGAGAGAAGAATACAAACCTGAAGAGATACGTTGGGAAGATGTTGCTAATGATGCAGAGACTGGGAAGATTTATATGCCAGGTTACTATGACAGGCATGGTAGGACAGTCCTAGTAATGAGGCCTAGTCGCCAGAGAAGTACACATGATATAAAAGAACAGATTATGTATTTTGTATACTGCATAGAGAATGCCATATTCAATCTTCCACCAAATCAAGAAGAGATAGTTTGGCTGGTTGATTTCCAGGGTTACACTTTGGCAAACCTTTCATTCAAGATCACACGTGAAACTGCTTTTATATTACAAGAATATTATCCAGAGCGCCTTGGTTTGGGATTTATGTATAATGCACCTAGGATCTTCCGGCCATTCTATGCGATGGTGAAGCCTCTGTTAGAGTCCAAGACTTACAACAGAATTAAGTTCGGTTACTCAAACGATCACAACACCAAGAAGATGATAGAGGATTTGTTCGATATGGATCAACTCGATTCTGCATTTGGTGGGAACAATGACACTGGATTTGATATAGTAAAATATGCTGAGAGAATGAAAGAGCAGGATAAGAAGGTTGCCTCTTTCTGGGCACTGGTAAAGACTCCATCATCATCAGTGTCACACAGTGCAAGTTCTTCAGACTCAACCAGTTTAGATCCAGATTCTGATGGTTCTAACACAGAGAATTGA 918 0.3976 MMSSVDHRNSSTVYKGHEKISISQEEQEKINEVRRLIGPLSAKASVYCSDLSISRYLRSKNWNVKKATQMLQRSLKWREEYKPEEIRWEDVANDAETGKIYMPGYYDRHGRTVLVMRPSRQRSTHDIKEQIMYFVYCIENAIFNLPPNQEEIVWLVDFQGYTLANLSFKITRETAFILQEYYPERLGLGFMYNAPRIFRPFYAMVKPLLESKTYNRIKFGYSNDHNTKKMIEDLFDMDQLDSAFGGNNDTGFDIVKYAERMKEQDKKVASFWALVKTPSSSVSHSASSSDSTSLDPDSDGSNTEN* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0774 305 PANTHER CRAL-TRIO LIPID BINDING DOMAIN, CRAL/TRIO DOMAIN-CONTAINING PROTEIN-RELATED 12 304 - -
Amo08g0774 305 SUPERFAMILY CRAL/TRIO N-terminal domain 21 90 IPR036273 -
Amo08g0774 305 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 88 252 IPR001251 -
Amo08g0774 305 MobiDBLite consensus disorder prediction 277 305 - -
Amo08g0774 305 SUPERFAMILY CRAL/TRIO domain 88 267 IPR036865 -
Amo08g0774 305 SMART sec14_4 94 249 IPR001251 -
Amo08g0774 305 MobiDBLite consensus disorder prediction 1 20 - -
Amo08g0774 305 Pfam CRAL/TRIO domain 96 246 IPR001251 -
Amo08g0774 305 Gene3D - 3 285 IPR036865 -
Amo08g0774 305 CDD SEC14 96 247 IPR001251 -
Amo08g0774 305 SMART CRAL_TRIO_N_2 49 74 IPR011074 -
Amo08g0774 305 PANTHER GH16843P 12 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0774 Amo-Chr8 13727346 13730214 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0774 - - gmx:100777106 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0774 08 13727346 13730214 Amo17g1498 17 53930907 53937856 hybridization
Amo17g1498 17 53930907 53937856 Amo08g0774 08 13727346 13730214 PCT
Amo08g0774 08 13727346 13730214 Amo17g1498 17 53930907 53937856 PCT