Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0696 AGGAATGTTGGGCTGAGGAAAACTCAGATGGACAGGCCCACAAAAACCCAGGCCCATAAAGAAGGTATTTTCTTGCTGAGTCATCATCGGCTTCTTCCTTCCCTTACTGAGCAGCTGCAATCTTTCAATCTGCAAACGCTTCCTTTTTTCCCTTCGCCATGCCTCTTTCAAAGCAACAACTCCTTTCTCGAACTTCAGATCGAGTTTTCTCGTTACGAGCATCCTGTTGTTTTGACTGTTGAGGCTCAGGCAAAGTATGTTGGACATTTGGGGGGAGGATTGAGTAAAAATTTGTTTTTGAAGGACAAGAAAAACAGATTTTATATCGTTTCTGCTTTAGCTGATACCAAGGTAGATCTTAAAGTGCTATCTCAGCGGCTTGGTTTAGGAAAAGGGGGTCTTAGAATGGCACCTGAAGAGGCTTTGGGTGAAATACTTCAGGTGTCTCTGGGTTGTGTTACTCCATTTGCATTAGTGAATGAATCAGCACGAGATGTTTCACTTTTATTGGATCAAGGATTCAAGGCACAGACGCATTGCTTCTTCCACCCATTGTCAAATGACATGTCCATATCTCTAAATGCAAGTGGTCTTGACAAATTTCTTAAATCAATAGGAAGAAATCCCTCATATGTTGATTTGGAGGCCAATCCTCCAGTGGGGAAAGATCAACCACCTGATCTTGCTGCTCTACAACCTTCTTCACAAGTTCCTAAGGACGGAAACCTTGTTTCTGTGGATAACAGTTCCAAGACAGTTTCAGGTAAAAATTCTAGTAACAATTTTATCACTGTGCAAAGCGTCAAGCCAGCTGTTAGTGAGAAAAATGCAAAGGGGGCACCAGTAAAAAATGAACGTTTATCAAGCTCCTCAGCTAATGTTGGGCAATTCGTTGAGGAGATTTTGCAAAAAACATCTGAATTAGTGCTTTTGCAGGTAAAGAAATATAAAGCAACATGGAGAGCAGCTTGTACCGTGGTATCCGACAATTTACGGAAAAACCTGAGCTCAGATTTCAAAAACCTTGCTATGATATTTAAGAACACCGCATACACAGAAGGGTTCCATGCTGGTACTCAACATCAGCGCAGGGGCTTTTGA 1101 0.4196 RNVGLRKTQMDRPTKTQAHKEGIFLLSHHRLLPSLTEQLQSFNLQTLPFFPSPCLFQSNNSFLELQIEFSRYEHPVVLTVEAQAKYVGHLGGGLSKNLFLKDKKNRFYIVSALADTKVDLKVLSQRLGLGKGGLRMAPEEALGEILQVSLGCVTPFALVNESARDVSLLLDQGFKAQTHCFFHPLSNDMSISLNASGLDKFLKSIGRNPSYVDLEANPPVGKDQPPDLAALQPSSQVPKDGNLVSVDNSSKTVSGKNSSNNFITVQSVKPAVSEKNAKGAPVKNERLSSSSANVGQFVEEILQKTSELVLLQVKKYKATWRAACTVVSDNLRKNLSSDFKNLAMIFKNTAYTEGFHAGTQHQRRGF* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0696 366 PANTHER YBAK DOMAIN-CONTAINING PROTEIN 63 363 IPR040285 -
Amo08g0696 366 MobiDBLite consensus disorder prediction 229 258 - -
Amo08g0696 366 Gene3D - 59 221 IPR036754 GO:0002161
Amo08g0696 366 MobiDBLite consensus disorder prediction 213 258 - -
Amo08g0696 366 SUPERFAMILY YbaK/ProRS associated domain 64 214 IPR036754 GO:0002161
Amo08g0696 366 Pfam Aminoacyl-tRNA editing domain 74 200 IPR007214 GO:0002161
Amo08g0696 366 CDD PrdX_deacylase 64 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0696 Amo-Chr8 12426071 12431141 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0696 - - ahf:112764287 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0696 08 12426071 12431141 Amo17g2754 17 128667551 128672743 hybridization