Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0577 AGTCTCTTCTTCTCCATCATTGAAGCAGTGTCGTCCTTCCATCTTTGGTTTTTACCATCAACACCTGGTGGGCAGCCTATGACGCCAAATTCCGCTATGTATCTTCCTAGCACAGTTTTAGGTGGGGACAATGAGGGGCCATGGTTTATGCCAGACATATTAGTTAATGTACATAGGCCAGGTGAAGAATCTGCTGGAGTTATAAGAGAGGTTCTTCCGGATGGGTCTTGCAAGGTAGCGCTTGGCTCAAGTGGAAATGGTGAAACGATAACTGCCCTTCCCAATGAAATGGAGGCCGTGGTGCCAAGGAAATCAGACAAAATAAAGATAATGGGTGGAGCATTGAGGGGGTCTACAGGCAAGTTGATTGGTGTAGATGGTACTGATGGTATTATAAAGGTAGATGACACATTGGAAATCAAGATTTTAGACCTAGTTATTTTGGCTAAATTAGCTCAACCATGA 465 0.4409 SLFFSIIEAVSSFHLWFLPSTPGGQPMTPNSAMYLPSTVLGGDNEGPWFMPDILVNVHRPGEESAGVIREVLPDGSCKVALGSSGNGETITALPNEMEAVVPRKSDKIKIMGGALRGSTGKLIGVDGTDGIIKVDDTLEIKILDLVILAKLAQP* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0577 154 CDD KOW_Spt5_6 95 152 IPR041980 -
Amo08g0577 154 PANTHER TRANSCRIPTION ELONGATION FACTOR SPT5 17 152 - -
Amo08g0577 154 PANTHER SUPPRESSOR OF TY 5 17 152 IPR039659 GO:0006357|GO:0032784
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0577 Amo-Chr8 10521750 10522694 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0577 K15172 - adu:107460569 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0577 08 10521750 10522694 Amo17g2610 17 125395521 125402748 hybridization