Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0570 ATGGCAACAGCCTTGTCCACAACCTGTTTTCTTTCCTGGAGGAACCACCATCAAGTGAATATACAACCCTCTCCATTACAAAATGGAGTTCAAAGAGTTTCAGCTGATTCAGTATCAAAGAGGAGTTGTTTGACCAATGAAGAAAGCCAGAGATGTTCCACTTTGTCTTTGGTGAACAGAAGAGCGGTTTTGGCTTCTGGGGTGTGCTTGTTGGGTTTTCCAGGGGAGAGTTTTGCGGTTGTGAAACAAGGTCTTCTAGCAGGGAGAATCCCTGGCCTGTCAGAGCCAGACGAAAAGTTGTTTTGGAATAACATAGTTTATCCTTCATTTGATCAGACAGGTTGGAGGACATACCGCAGGCCGGATGATAAGTCCGGTGGACATGGTGTTGGATGGAGTCCTATTATACCATACGCTTTCCGAGTACCTGAGGAATGGGAAGAGGTACCAGTATCAATAGCAGATCTTGGTGGCACTGAGATAGATTTGAGATTTGCAAACTCTAAGCAAGGGCATCTGTTTGTCGTTGTTGCTCCTGTTCTTAGATTTGCTGATAATCTTGGTGATGATGCTACAATAGAAAAAATCGGACCTCCAGAGAAAGTCATCAATGCATTTGGTCCGGAAATGATTGGGGACAATGTCGAGGGAAAGGTTCTAAGTTCAGACGTAGCAGAACACAATGGAAGAACATACTACCAGTTTGAGCTAGAGCCTCCTCATATTTTTATTACTGCTACTGCAGCTGGAAATCGCTTGTACCTGTTTGGTGTAACAGGCAGTGGTCTTCAGTGGAAGAGACACTACAATGATTTGAAGAAGATAGCTGAGTCTTTTCGAGTTGTATAA 849 0.4382 MATALSTTCFLSWRNHHQVNIQPSPLQNGVQRVSADSVSKRSCLTNEESQRCSTLSLVNRRAVLASGVCLLGFPGESFAVVKQGLLAGRIPGLSEPDEKLFWNNIVYPSFDQTGWRTYRRPDDKSGGHGVGWSPIIPYAFRVPEEWEEVPVSIADLGGTEIDLRFANSKQGHLFVVVAPVLRFADNLGDDATIEKIGPPEKVINAFGPEMIGDNVEGKVLSSDVAEHNGRTYYQFELEPPHIFITATAAGNRLYLFGVTGSGLQWKRHYNDLKKIAESFRVV* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0570 282 Pfam PsbP 138 281 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Amo08g0570 282 SUPERFAMILY Mog1p/PsbP-like 130 281 IPR016123 -
Amo08g0570 282 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 135 282 - -
Amo08g0570 282 PANTHER - 16 282 - -
Amo08g0570 282 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 16 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0570 Amo-Chr8 10452541 10454494 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0570 - - aip:107647824 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0570 08 10452541 10454494 Amo17g2611 17 125404690 125408461 hybridization