Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0512 ATGTCAGAAACTCTTCGTATGATTGTTGCTGTTGTTGGAAATGCTGCTTCTGTAGCACTTTATGCTGCACCAACTGTAACCTTCAAGAGGGTGATAAGGAAGAAAAGCACTGAGGATTTCTCATGCATTCCCTACATCATAGGACTCTTGAATTGTCTCTTGTTCACATGGTATGGATTGCCAATTGTGAGTTACAAGTGGGAAAATTTCCCTCTTGTTACTGTTAATGGAGTTGGGATTGTTCTTGAGTTCTCCTATGTTGTCATCTATTTCTGGTTTGCTTCTTCTAAGGGAAAGGTGAAGGTGGCAATGGTGACAATACCAGTTCTTATACTGTTCTGCATAGCTGCTGCAGTTTCAGCTTTTGCATTTCATGACACTCATCAAAGAAAGTTGCTTATTGGAAGCATAGGTTTAGGTGTTTCTGTTGCCATGTATGCTTCTCCTCTTGTTGCCATGAAACAAGTCATAAAAACCAAGAGTGTGGAGTTTATGCCTCTACCATTATCTTTGTGCTCTTTCTTGGCTGGTTCACTATGGATGACTTATGGATTCATGATTCGCGATATATTTGTTGCGGGACCAAGTGTGGTTGGAGTGCCATTGGCCATACTCCAATTAGTTCTCCACTGCAAATACCGGAAAAGGAGKGTTTTGGAGGTACCAAACAAGGAGGGAATGGAAGAAAATGGTAACTTTGAGAAAGTGGATTTGGAAAAGGGAAGCTTGGAAATGAATGAAGTGGAAATCAATGTGACAAATCAAAAGAACAATGGAGACAACTTGTGA 789 0.4056 MSETLRMIVAVVGNAASVALYAAPTVTFKRVIRKKSTEDFSCIPYIIGLLNCLLFTWYGLPIVSYKWENFPLVTVNGVGIVLEFSYVVIYFWFASSKGKVKVAMVTIPVLILFCIAAAVSAFAFHDTHQRKLLIGSIGLGVSVAMYASPLVAMKQVIKTKSVEFMPLPLSLCSFLAGSLWMTYGFMIRDIFVAGPSVVGVPLAILQLVLHCKYRKRXVLEVPNKEGMEENGNFEKVDLEKGSLEMNEVEINVTNQKNNGDNL* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0512 262 Gene3D - 132 221 - -
Amo08g0512 262 Gene3D - 10 107 - -
Amo08g0512 262 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 257 - -
Amo08g0512 262 Pfam Sugar efflux transporter for intercellular exchange 9 97 IPR004316 GO:0016021
Amo08g0512 262 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016021
Amo08g0512 262 PANTHER RAG1-ACTIVATING PROTEIN 1 4 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0512 Amo-Chr8 9428250 9429884 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0512 1 260 Miscellaneous Gene Families AT5G53190 49.618 1.71e-91 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0512 K15382 - gmx:100813119 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0512 08 9428250 9429884 Amo17g2542 17 123952022 123953720 hybridization