Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0345 ATGAGGCCTCCGAAAAAGTCGATCCACGCCGTCACCACATGGGTGCGGCGGCAGCCTCCGAAAGTAAAGGCTTTTCTCGCCGTCGTTTCGGGCATGGCGGCGCTCGTGTTTCTCCGCTTCATCGTTCACGATCATGACAACCTTTTTGTCGCCGCTGAAGCTGTCCACTCCCTTGGAATCTCCGTTCTCATCTACAAGCTCATGAAAGAGAAGACTTGTGCCGGATTATCGCTCAAATCTCAGGAATTGACGGCTATGTTTTTAGCTGTTAGGCTGTATTGCAGTTTTGTCATGGAATATGACATTCACACCATACTTGATTTGGCTACTTTGGGTACAACACTCTGGGTTATATACATGATCCGTTTTAACTTGAGGTCTAGTTACATGGAGGAGAAGGACAATTTTGCAATATATTATGTGGTGATACCTTGTGCTGTGTTAGCCTTGTTTATTCATCCATCAACTTCTCATCATTTATTGAACAGGATTTTCTGGGCATTCTGTGTGTATCTTGAAGCTGTATCAGTACTACCCCAATTGAGGGTCATGCAGAACACCAAAATTGTTGAACCATTCACAGCTCATTATGTGTTTGCACTTGGTGTCGCAAGATTCCTCAGCTGTGCACATTGGGTTCTTCAGGTGTTAGATAGCCGTGGACATTTGTTGGTTGCCTTGGGGTATGGTTTATGGCCATCAATGGTTCTTATCTCAGAAATTGTCCAGACTTTTATCCTTGCAGATTTCTGCTATTATTATGTCAAAAGTGTTTTCGGGGGACAGCTTGTTCTTCGCCTTCCATCTGGAGTGGTATAA 819 0.4444 MRPPKKSIHAVTTWVRRQPPKVKAFLAVVSGMAALVFLRFIVHDHDNLFVAAEAVHSLGISVLIYKLMKEKTCAGLSLKSQELTAMFLAVRLYCSFVMEYDIHTILDLATLGTTLWVIYMIRFNLRSSYMEEKDNFAIYYVVIPCAVLALFIHPSTSHHLLNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0345 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 1 271 IPR000133 GO:0006621|GO:0016021|GO:0046923
Amo08g0345 272 PANTHER ER LUMEN PROTEIN-RETAINING RECEPTOR C28H8.4-RELATED 1 271 - -
Amo08g0345 272 Pfam ER lumen protein retaining receptor 72 214 IPR000133 GO:0006621|GO:0016021|GO:0046923
Amo08g0345 272 PRINTS ER lumen protein retaining receptor signature 48 67 IPR000133 GO:0006621|GO:0016021|GO:0046923
Amo08g0345 272 PRINTS ER lumen protein retaining receptor signature 75 95 IPR000133 GO:0006621|GO:0016021|GO:0046923
Amo08g0345 272 PRINTS ER lumen protein retaining receptor signature 166 186 IPR000133 GO:0006621|GO:0016021|GO:0046923
Amo08g0345 272 PRINTS ER lumen protein retaining receptor signature 188 202 IPR000133 GO:0006621|GO:0016021|GO:0046923
Amo08g0345 272 PRINTS ER lumen protein retaining receptor signature 202 220 IPR000133 GO:0006621|GO:0016021|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0345 Amo-Chr8 6768696 6771299 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0345 5 272 Miscellaneous Gene Families AT2G21190 89.179 0.0 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0345 - - cpap:110816552 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0345 08 6768696 6771299 Amo17g2127 17 110165250 110167245 hybridization