Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g2217 ATGCAAGCATTACTTGCATGCTTTCCACATCCTCATGGAAACCCACTTCTCAAATTCAATTCACAATCACAAAGACTAAATTCTCTGCCCACTTTGTTTTCCACTTCCAAGTTCTTCCCACCCCAACCACAAATTTTTCTTTACCCTTCTAGTTTTGTTCTTAACACACCAAAATCACCCACAATTCGATCCCCAAAACATGGTCAAGTTCGTTGTGGCATTTCGTCGAACGGGAACAGTTCAAACGAGAAAAAAAGTGTTAAGGAGTGGTTTGAGGTATGTGGTGAGGCACTTTCAAATGCGTTTCCTTTGTGGGTGACTCTTGGGTGCGTGTTGGGGTTGGTGAGACCCAATTGCTTCAGTTGGGTCACTCCAAGATTGAACATTGTGGGACTCACCATAATTATGGTTGGTATGGGTATGACACTCACACTTGATGATCTTCGTGGTGCTCTTTCTATGAACAAAGAAGTACTGTCTGGTTTTGTGCTTCAATACTCGGTGATGCCATTATCGGGATTCTTTGTAAGCAAACTCTTAAACCTTCCATCACATTATGCAGCAGGTTTAATATTAGTTGCCTGCTGTCCTGGKGGCACGGCGAGTAACCTTGTTACTTATCTTGCACGCGGAAATGTTGCACTTTCGGTGATAATGACGGCTGCAAGCACTCTAACAGCTGTGGTCATGACTCCTTTATTGACAGCTAAACTTGCTGGCAAGTATGTAGCTGTGGATGGATCTGGTTTATTGATTTCAACATTGCAAGTTGTGCTGCTTCCTGTATTGGCCGGCGCATTGCTGAACCAATATTTCCAACCTCTTGTTAAATTAGTCTCTCGGCTGATGCCRCCMATGGCAGTAGCAACTGTGGCAATCTTATGTGGAAATGCAATCGCGCAAAGTTCTTCAGCAATCCTTATGTCTGGTGGACAAGTAATTTTAGCATCCTCCCTTCTTCACGCTTCCGGATTTTTCTTCGGATATATACTTGCAAGAATGCTTGGGCTAGATGTSACAACATCGCGAACCATATCTATTGAGGTTGGCATGCAGAACTCTGTTCTTGGAATTGTTCTGGCTACTCAGCACTTTGGGGATCCCTTAACTGTGGTACCCTGCGCCATTTCGAGTGTGTGTCACAATATCTTTGGTAGCATTCTTGCCGGAGTTTGGCGACACTCTGCGCCCGCTGAGAAAAAGGATTGA 1209 0.4417 MQALLACFPHPHGNPLLKFNSQSQRLNSLPTLFSTSKFFPPQPQIFLYPSSFVLNTPKSPTIRSPKHGQVRCGISSNGNSSNEKKSVKEWFEVCGEALSNAFPLWVTLGCVLGLVRPNCFSWVTPRLNIVGLTIIMVGMGMTLTLDDLRGALSMNKEVLSGFVLQYSVMPLSGFFVSKLLNLPSHYAAGLILVACCPGGTASNLVTYLARGNVALSVIMTAASTLTAVVMTPLLTAKLAGKYVAVDGSGLLISTLQVVLLPVLAGALLNQYFQPLVKLVSRLMPPMAVATVAILCGNAIAQSSSAILMSGGQVILASSLLHASGFFFGYILARMLGLDVTTSRTISIEVGMQNSVLGIVLATQHFGDPLTVVPCAISSVCHNIFGSILAGVWRHSAPAEKKD* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g2217 402 PANTHER SODIUM/METABOLITE COTRANSPORTER BASS1, CHLOROPLASTIC-RELATED 64 402 - -
Amo07g2217 402 PANTHER SODIUM-BILE ACID COTRANSPORTER 64 402 IPR004710 -
Amo07g2217 402 MobiDBLite consensus disorder prediction 63 82 - -
Amo07g2217 402 Gene3D - 86 395 IPR038770 -
Amo07g2217 402 Pfam Sodium Bile acid symporter family 130 303 IPR002657 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g2217 Amo-Chr7 67144606 67147970 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g2217 71 402 Organic Solute Cotransporters AT1G78560 75.000 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g2217 K03453 - tcc:18594413 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1944 18 45914881 45918949 Amo07g2217 07 67144606 67147970 hybridization