Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1832 ATGCATGCACACCACCACATTCCAAGCTTCACCACTTCAACCATGGGAACTAAGTGCAAAACTATCTTATTTGAAAAAGTCCTCTTCGCAATAATAATTTACTTCATATTCTCCACAACAAACACAACCAAAGCCCTTGACACATCATGTGCTTCTCAACCCGACCTCACCATCATTCCCATCTACGGCAAATGCTCCCCATTCAAACCCACACCAGGCCCATGGCCCGACACAATCATCAACATGGCCTCCAAAGACCCAGCCCGCCTCAACTACCTCGCCTCCCTCGTGGCCCGAAAAAAGCCCATATCGTCAGCACCCATAGCTTCGGGCCAGGCCTTCAACATTGGTGGCTACGTGGTCCGGGCCCGTCTCGGCACACCTGGCCAACTCATGTTCATGGTTTTCGACACCAGCACTGACGAGGCCTGGGTCCCATGCACCGGCTGCACCAGTTGCCCGTCCACCTCCTCTCCTTTCTCCCCCACTGCCTCCGCCACCTACGGCGGCTCCATCACCTGCTCCGCCACAAAATGCTATCAGGCTCGTGGCGCACAAACATGCCCCAGAGACCCCGGCGCCACCTCCGCCTGCACCTTCAATCAGTCGTACGGCGGAGCGATGGTCTCCGCTACGCTCGTCCAGGACTCAATCTCTTTGGCAAGGGAAACAATCTCGAATTACGCTTTCGGATGCGTTAATTCTGTTTCTGGCGGGTCGATTCCAGCCCAAGGGCTTTTGGGATTGGGTCGTGGGCCCTTGTCTTTTATTTCACAGTCCCTGTCGCTCTATAAGGGCGTGTTCTCATACTGTCTTCCGAGTTTCCGATCCTACTATTTTTCCGGGTCGTTGAAACTCGGGCGTTCGGGTCAGCCCAGGAGGATCCAAACGACGCCGCTTTTGCGTAACCCACGCCGGCCCTCGCTTTACTACGTAAATCTCACCGGAGTGAGCGTGGGCCGGGTAAGGGTCCCTGTGCCACGGGAGTTTCTGGTGTTTAACCAGTACACGGGTTCGGGTACAATAATTGATTCGGGTACGGTTATAACCCGGTTCGTGCAGCCGGTTTACAATGCTATCAGGGACGAGTTTAGAAGACAGGTAAAAGGGCCATTTTCAAGTTTAGGTGCATTCGACACTTGTTTTCAAAAGACCTACGAAAAATTGGCACCAATCATCAAACTCCATTTTGAAGGCATGGACCTAAAGTTGCCATATGAGAACAGCCTCATACACAGTAGTTCTGGATCGTTGGCTTGTCTGGCGATGGCGGCTGCACCCAACAACGTGAACTCAATGTTGAATGTGATCGCCAACTTGCAGCAACAGAATCTTAGAATTCTGTTTGATATAGTTAATAATAAGGTTGGCATAGCCCGTGAGCTTTGTAACTAG 1395 0.5204 MHAHHHIPSFTTSTMGTKCKTILFEKVLFAIIIYFIFSTTNTTKALDTSCASQPDLTIIPIYGKCSPFKPTPGPWPDTIINMASKDPARLNYLASLVARKKPISSAPIASGQAFNIGGYVVRARLGTPGQLMFMVFDTSTDEAWVPCTGCTSCPSTSSPFSPTASATYGGSITCSATKCYQARGAQTCPRDPGATSACTFNQSYGGAMVSATLVQDSISLARETISNYAFGCVNSVSGGSIPAQGLLGLGRGPLSFISQSLSLYKGVFSYCLPSFRSYYFSGSLKLGRSGQPRRIQTTPLLRNPRRPSLYYVNLTGVSVGRVRVPVPREFLVFNQYTGSGTIIDSGTVITRFVQPVYNAIRDEFRRQVKGPFSSLGAFDTCFQKTYEKLAPIIKLHFEGMDLKLPYENSLIHSSSGSLACLAMAAAPNNVNSMLNVIANLQQQNLRILFDIVNNKVGIARELCN* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1832 464 ProSiteProfiles Peptidase family A1 domain profile. 119 459 IPR033121 -
Amo07g1832 464 SUPERFAMILY Acid proteases 112 463 IPR021109 -
Amo07g1832 464 Pfam Xylanase inhibitor C-terminal 310 459 IPR032799 -
Amo07g1832 464 Gene3D Acid Proteases 97 286 IPR021109 -
Amo07g1832 464 PANTHER ASPARTYL PROTEASE AED3-LIKE 32 464 - -
Amo07g1832 464 PANTHER ASPARTYL PROTEASES 32 464 IPR001461 GO:0004190|GO:0006508
Amo07g1832 464 Gene3D Acid Proteases 287 464 IPR021109 -
Amo07g1832 464 Pfam Xylanase inhibitor N-terminal 119 287 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1832 Amo-Chr7 54656568 54660180 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1832 109 464 Miscellaneous Gene Families AT1G77480 24.615 5.96e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1832 - - aip:107608124 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g3052 17 133822705 133824407 Amo07g1832 07 54656568 54660180 hybridization