Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1804 ATGGCCTCCAATTCACACAGGGCGGCTCCTTTCTACGGCGTCGCTGCCCCTTTCCGGTCAAGAGATGGGCTTAGCACAAGGGCAGTATCGGGGACCGACGAGATCCAATTGCGAATTGATCCCTTCGACTTGGAGGACGAGATCACCGGTCTTCATACCCAAGTTAGAAGGTTGAAACATGTTGCAAACGAGATAGGCACAGAAGTAAAGTATCAAAAGGATTTTTTGGAACAAGTGCAAATGGGAATAATGAAGGCTCAGGTAGGGGTGAAGAATAATATGAGAAGATTGAACAAGGCCGTGATTAAAAGTGGCTCGAATCACATTCTTCATATCGTTACATTTGGTTTAGTTTTGTTTCTCATAGTATACCTTTGGTCCAAGATTTCCAGAAAATGA 399 0.4436 MASNSHRAAPFYGVAAPFRSRDGLSTRAVSGTDEIQLRIDPFDLEDEITGLHTQVRRLKHVANEIGTEVKYQKDFLEQVQMGIMKAQVGVKNNMRRLNKAVIKSGSNHILHIVTFGLVLFLIVYLWSKISRK* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1804 132 SUPERFAMILY SNARE fusion complex 43 99 - -
Amo07g1804 132 PANTHER GOLGI SNARE BET1-RELATED 9 131 IPR039897 GO:0015031|GO:0030173
Amo07g1804 132 Gene3D - 45 100 - -
Amo07g1804 132 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 9 131 - -
Amo07g1804 132 CDD SNARE_Qc 43 99 - -
Amo07g1804 132 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 46 100 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1804 Amo-Chr7 53231533 53234331 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1804 K08505 - gmx:100306642 199.904
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g3068 17 134520028 134522160 Amo07g1804 07 53231533 53234331 hybridization
Amo07g1804 07 53231533 53234331 Amo17g3068 17 134520028 134522160 PCT
Amo17g3068 17 134520028 134522160 Amo07g1804 07 53231533 53234331 PCT