Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1707 ATGGCTGCAGGGGGATTTGCCATTGATGCTTCGGCTAACGGATTCGACGGTAGGATCACATTCTCCGTTGTCATCACTTGTATTGTTGCTGCATCCGGTGGACTCATTTTTGGATATGACATTGGGATTTCGGGAGGTGTAACAACTATGAGGCCGTTTCTTGAAAAATTCTTTCCAGCAATACTTAGAAAAGCTGCTAGTGCGGAAACAAACGTATACTGCGTGTATGATAGTCAAGTATTGACATTGTTCACGTCCTCCCTCTACCTGGCGGGGCTGSTGTCGTCTCTTCTAGCTAGCCGAGTCACCACGGCATTGGGCCGGAGAAACACCATGATCTTGGGTGGTTGTATCTTCTTCGCCGGGGGGGTCATTAATGGTAGCGCTGAAAATATCGTCATGCTCATATTGGGTCGCATCTTGTTAGGCTTTGGAGTTGGTTTTACTAATCAAGCCACTCTAGTGTACCTGTCTGAAATTGCACCACCTAAATGGCGAGGTGCCTTCAACACAGGCTTCCAATTCTTCATCGGAGTCGGCGTGGTGGCCGCGAACCTTATAAACTACTTCACAGCAAACCACTCGTGGGGCTGGCGACTCTCCCTCGGCCTCGCCGCCGTCCCAGCCGCCTTCATGACTATCGGAGCATTCCTCATCCCCGACACCCCGAGCAGCTTAGTAGAGCGTGGCAAAATAGACCACGCACGACAAGCGTTACAGAAAGTAAGAGGCCACACAACAAATGTGGGACCCGAACTAGAAGAACTGATTCGGTTTTCGAAAACCGACATGATGGATCAAGAGAGATTCGTAACCATATTTGAGAGGCAGTATCGGCCTCAGTTGGTTATGGCTTTTGCTGTGCCATTGTCTCAGCAACTTACTGGGATCAATATCGTTGCATTCTACGCGCCTAATTTGTTTCAGTCTGTGGGATTTGGTAACCGCTCCGCTTTGCTTTCAGCTGTTATATTGGGACTCGTCAACCTTGGTTTCATACTGGTGTCTGCTTCCATTGTTGATCGATTTGGTCGAAGATTCTTGTTCATTGCTGGTGGTATTCAAATGCTTCTCTGCATGACTGCAGTGGCTGTGGTGTTAGCACTAGTGAGTGGCGTTGAAGGCACAGAAAGCATTTCGAAGGGGAACACTATACTCATATTGGTGCTGCTCTGCTTCTACGCCGCAGGATTCGGTTGGTCATGGGGCCCCCTCTGCTGGCTGATTCCTAGTGAGATCTTCCCCTTAAAGATCAGGTCTCCTGGCCAAAGCATTGCCGTTGCAGTTCAGTTATTAACGGTAAGGATAGGACGGGAATCTAAGCTCTCGAGATTTGGAGAGTAA 1344 0.4888 MAAGGFAIDASANGFDGRITFSVVITCIVAASGGLIFGYDIGISGGVTTMRPFLEKFFPAILRKAASAETNVYCVYDSQVLTLFTSSLYLAGLXSSLLASRVTTALGRRNTMILGGCIFFAGGVINGSAENIVMLILGRILLGFGVGFTNQATLVYLSEIAPPKWRGAFNTGFQFFIGVGVVAANLINYFTANHSWGWRLSLGLAAVPAAFMTIGAFLIPDTPSSLVERGKIDHARQALQKVRGHTTNVGPELEELIRFSKTDMMDQERFVTIFERQYRPQLVMAFAVPLSQQLTGINIVAFYAPNLFQSVGFGNRSALLSAVILGLVNLGFILVSASIVDRFGRRFLFIAGGIQMLLCMTAVAVVLALVSGVEGTESISKGNTILILVLLCFYAAGFGWSWGPLCWLIPSEIFPLKIRSPGQSIAVAVQLLTVRIGRESKLSRFGE* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1707 447 SUPERFAMILY MFS general substrate transporter 28 432 IPR036259 -
Amo07g1707 447 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 3 434 IPR045262 GO:0015144
Amo07g1707 447 ProSiteProfiles Major facilitator superfamily (MFS) profile. 26 447 IPR020846 GO:0022857
Amo07g1707 447 Gene3D MFS general substrate transporter like domains 18 249 IPR036259 -
Amo07g1707 447 ProSitePatterns Sugar transport proteins signature 2. 141 166 IPR005829 GO:0016021|GO:0022857|GO:0055085
Amo07g1707 447 Pfam Sugar (and other) transporter 27 432 IPR005828 GO:0016021|GO:0022857|GO:0055085
Amo07g1707 447 Gene3D MFS general substrate transporter like domains 260 436 IPR036259 -
Amo07g1707 447 TIGRFAM SP: MFS transporter, sugar porter (SP) family 22 432 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo07g1707 447 CDD MFS_STP 29 432 IPR044778 GO:0015145|GO:0015749
Amo07g1707 447 PRINTS Sugar transporter signature 292 302 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo07g1707 447 PRINTS Sugar transporter signature 136 155 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo07g1707 447 PRINTS Sugar transporter signature 34 44 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo07g1707 447 PRINTS Sugar transporter signature 388 409 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo07g1707 447 PRINTS Sugar transporter signature 411 423 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo07g1707 447 PANTHER SUGAR TRANSPORTER 3 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1707 Amo-Chr7 48732268 48740233 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1707 50 430 Organic Solute Cotransporters AT1G34580 64.416 3.81e-171 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1707 K24193 - adu:107459105 810.061
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g1657 17 70463628 70473513 Amo07g1707 07 48732268 48740233 hybridization