Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0919 ATGGAACAACTGAAGCCAAGTGCTGCAAACTCTTCACCTCTCACTCCACTAGGTTTCTTGGACAGAGCAGCAACTGTTTACGGAGACACACCTTCCGTTATCTATGACGGCGTTACCTTCACCTGGTCCGACACTCGCCGTCGCTGCCTCCAGCTGGCCTCTGCTCTCTCCTCCCTAGGAATCCGCCGCGGCGACGTGGTGTCCGTCGTCGCACCAAACATACCCGCCATGTACGAGCTCCACTTTGCAGTCCCCTTCGCCGGCGCTATCCTCAACAACATCAACACACGCCTCGATGCCAGAACCATCTCTGTTATCCTCCGTCACGCGGAGTCCAAGCTCGTCTTTGTGGACACAGCTTCACGTGATGTTGTCCTCGAAGCTCTCTCTTTATTCCCCGAAAATCCCCGTCGTCCGATCCTCATCTTTATAGCGGACGATGCGGTCGAACGACTAACTCCATCATCAATCGTTCATTTCAAAGACTCGTATGAAGGTTTAATCTCCAAGGGCGATCCGAATTTTAAATGGTTCTATCCTAACAGCGAGTGGGACCCGATGATACTTAACTACACCTCCGGAACGACGTCGTCTCCTAAAGGCGTAGTTCACTGCCACAGAGGAACCTTTGTTATGACTGTTGATTCGTTGATAGATTGGGCGGTTCCGAAACAACCGGTTTATCTCTGGACTCTACCGATGTTCCACGCTAACGGATGGAGCTTCCCGTGGGGAATGGCCGCCGTTGGAGGAACGAATATCTGCGTCCGCAAATTCGACGCGCGGATCGTGTTCTCCCTCATCACGCGCCACCGCGTGACTCACATGTGTGGCGCGCCGGTGGTGCTGAACATGCTCACAAACGCTCCCGACAACAAGCCGTTGGAGAATCCCGTTCACATCCTCACCGCCGGAGCGCCGCCTCCCTCGGCGGTGCTCCACCGCACGGAGTCTTTAGGATTCATAGTCAGCCACGGGTACGGCCTGACCGAGACTGGAGGACTGGTCGTGTCGTGCGCGTGGAAGAGGAAGTGGAACCATTTCCCGGCGGCGGAGAGGGCGAGGTTGAAGTCTCGTCAGGGAGTAAGAACATGCCTACTGACGGAAATGGACGTGGTGACACACGCGGGAGAGAGCGTGAAGCGTGACGGGGTAACGCTGGGTGAGGTAGTTATGCGCGGAAGCTGTGTGATGCTTGGATACCTTAAAGATCCCGAAGGAACAAGAAAATGTTTCAAAAATGGTTATTTCTACACCGGCGATGTTGGTGTGATGCATGAAGACGGTTACTTGGAGATAAAGGATAGGTCAAAGGACGTTATAATTAGCGGCGGCGAGAACTTGAGCAGCGTGGAGGTGGAATCGGTGCTTTATATGCACCCGGCGGTGAACGAGGCGGCTGTGGTGGCGAGGCCGGACGAGTACTGGGGGGAGACGCCGTGCGCGTTCGTGAGCGTGAAGGAGGGGAAGGCGGTGACGGAGAAGGAGATAATTGAGCATTGCAGGAAGAACATGCCAAAGTATATGGTTCCCAAAACGGTTGCGTTTAGGGAGGAGCTTCCAAAGACTTCCACCGGAAAGATTCAGAAGTTTGTTCTGAGACAAATTGCTCAAGAAATGGGACCCATCAGACACAGCAAAATGTGA 1647 0.541 MEQLKPSAANSSPLTPLGFLDRAATVYGDTPSVIYDGVTFTWSDTRRRCLQLASALSSLGIRRGDVVSVVAPNIPAMYELHFAVPFAGAILNNINTRLDARTISVILRHAESKLVFVDTASRDVVLEALSLFPENPRRPILIFIADDAVERLTPSSIVHFKDSYEGLISKGDPNFKWFYPNSEWDPMILNYTSGTTSSPKGVVHCHRGTFVMTVDSLIDWAVPKQPVYLWTLPMFHANGWSFPWGMAAVGGTNICVRKFDARIVFSLITRHRVTHMCGAPVVLNMLTNAPDNKPLENPVHILTAGAPPPSAVLHRTESLGFIVSHGYGLTETGGLVVSCAWKRKWNHFPAAERARLKSRQGVRTCLLTEMDVVTHAGESVKRDGVTLGEVVMRGSCVMLGYLKDPEGTRKCFKNGYFYTGDVGVMHEDGYLEIKDRSKDVIISGGENLSSVEVESVLYMHPAVNEAAVVARPDEYWGETPCAFVSVKEGKAVTEKEIIEHCRKNMPKYMVPKTVAFREELPKTSTGKIQKFVLRQIAQEMGPIRHSKM* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0919 548 ProSitePatterns Putative AMP-binding domain signature. 189 200 IPR020845 -
Amo07g0919 548 SUPERFAMILY Acetyl-CoA synthetase-like 11 539 - -
Amo07g0919 548 Pfam AMP-binding enzyme 21 443 IPR000873 -
Amo07g0919 548 PANTHER LONG-CHAIN ACYL-COA SYNTHETASE 2 543 - -
Amo07g0919 548 PANTHER ACYL-ACTIVATING ENZYME 2 543 - -
Amo07g0919 548 Pfam AMP-binding enzyme C-terminal domain 452 527 IPR025110 -
Amo07g0919 548 Gene3D - 439 541 IPR045851 -
Amo07g0919 548 Gene3D - 2 438 IPR042099 -
Amo07g0919 548 CDD ttLC_FACS_AEE21_like 12 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0919 Amo-Chr7 16884060 16886044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0919 1 540 EF-hand Containing Proteins AT1G21540 63.455 0.0 718
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0919 - - adu:107489788 943.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0625 17 13438174 13440366 Amo07g0919 07 16884060 16886044 hybridization