Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2819 ATGTTGTGCACTAAACTTCAATCGTCTCAACGGAAGAAAAAACCCGGTTTTCCAGTTTACCTTAATGTCTATGATCTTACGCCCATTAACGGTTATGCTTATTGGCTTGGCCTTGGAGTTTACCATTCTGGTGTTCAAGTTCATGGTATTGAATATGGATTTGGAGCGCACGAACGAGACACGACGGGAATCTTTGAAGTGGAGCCTAGGCACTGTCCTGGATTCACTTTCAGGAAGTCAATTTTCATTGGAAACACAGACATGGGACCAAATGATGTGAGGTGTTTGATGGAGAAGCTAGCCCAAGAGTTTTCAGGGAACACCTATCATCTTATCCAGAAGAACTGCAACCACTTTTGCCAAGATCTTTGTCTCAAATTAACAGGACGCTCCATCCCTCGATGGATAAATCGTCTTGCTCGAATTGGTTTTCTCTGCAACTGTGTTCTGCCGCCAAGCCTAAACGACACAAGAATCAATCCGCAGGAAGCAGAAAAGAAGAAAATGAGAACTCAATCCTGCAGGTTTGAGCCGGCTTTGTCCTCTCCTCCTTCGGTGTCTCGTGGCCATAGACATAGCCTTACTGCTCCTGGGTCTTTAGTAAACGATTCGCCAATGGCAACGGTTAAGGTAAAGTAA 639 0.4476 MLCTKLQSSQRKKKPGFPVYLNVYDLTPINGYAYWLGLGVYHSGVQVHGIEYGFGAHERDTTGIFEVEPRHCPGFTFRKSIFIGNTDMGPNDVRCLMEKLAQEFSGNTYHLIQKNCNHFCQDLCLKLTGRSIPRWINRLARIGFLCNCVLPPSLNDTRINPQEAEKKKMRTQSCRFEPALSSPPSVSRGHRHSLTAPGSLVNDSPMATVKVK* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2819 212 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Amo06g2819 212 MobiDBLite consensus disorder prediction 164 212 - -
Amo06g2819 212 Pfam PPPDE putative peptidase domain 18 151 IPR008580 GO:0008233
Amo06g2819 212 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 9 210 - -
Amo06g2819 212 PANTHER DESUMOYLATING ISOPEPTIDASE 9 210 IPR008580 GO:0008233
Amo06g2819 212 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Amo06g2819 212 Gene3D PPPDE domains 13 173 IPR042266 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2819 Amo-Chr6 93414011 93416109 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2819 K22763 - gmx:100786432 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3697 16 148051865 148053853 Amo06g2819 06 93414011 93416109 hybridization
Amo06g2819 06 93414011 93416109 Amo10g2189 10 76801448 76803775 PCT
Amo06g2819 06 93414011 93416109 Amo20g2646 20 122829425 122831454 PCT
Amo10g2189 10 76801448 76803775 Amo06g2819 06 93414011 93416109 PCT
Amo20g2646 20 122829425 122831454 Amo06g2819 06 93414011 93416109 PCT