Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2816 ATGTGCTTTGATTACCATGGTGCATGGTCCAATTTCACTGGCTACAATAATGCTTTATTTGATCCTAAGTCCAATATAAGCACCCAATTTGGTCTCGGATCTTGGATCCAGTCCGGCGTCCCGCCCTCAAAGCTGGTTTTCGGGTTACCGCTTTACGGGCGAGCGTGGAAGCTCCAAGATCCGAAAGTTCATGGGGACGGAGCGCCCGCAGTTGGAGCAGCCGATGGCACGGATGGTACTATGAATTATAATGATATRTTGGAATTTAATAAAAAGAATAAGGCTACAGTTGTGTTTGATAGGTCAGCTGTGTCTTATTACACTTATGCTGGCACTACTTGGATGAGCTATGATGATGCACCTTCCATGACAAGGAAGGTTCAATATTCTAAGTCTTTGGGATTGAAAGGATATTTCTTTTGGCAAGTTGGAGGCGATAAGAATTGGACTATGTCAAGACAAGCTTCAAGTACGTGGGGACACTGA 486 0.4444 MCFDYHGAWSNFTGYNNALFDPKSNISTQFGLGSWIQSGVPPSKLVFGLPLYGRAWKLQDPKVHGDGAPAVGAADGTDGTMNYNDXLEFNKKNKATVVFDRSAVSYYTYAGTTWMSYDDAPSMTRKVQYSKSLGLKGYFFWQVGGDKNWTMSRQASSTWGH* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2816 161 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 1 161 IPR001223 GO:0005975
Amo06g2816 161 Gene3D - 51 117 IPR029070 -
Amo06g2816 161 PANTHER CHITINASE 1 160 - -
Amo06g2816 161 Gene3D Glycosidases 1 147 - -
Amo06g2816 161 SUPERFAMILY (Trans)glycosidases 1 152 IPR017853 -
Amo06g2816 161 Pfam Glycosyl hydrolases family 18 1 146 IPR001223 GO:0005975
Amo06g2816 161 PANTHER CLASS V CHITINASE CHIT5A 1 160 - -
Amo06g2816 161 SUPERFAMILY Chitinase insertion domain 52 117 IPR029070 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2816 Amo-Chr6 93373813 93374428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2816 1 159 Glycoside Hydrolase AT4G19810 45.342 1.48e-38 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2816 K01183 - gmx:100787511 242.276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3699 16 148100542 148102035 Amo06g2816 06 93373813 93374428 hybridization