Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2265 ATGGAGAATGCTAATGCTGCGAATTCACCTTCTGCGAATCAATCTTCCTCTTTGAAGGAAGAAGAGATTAATAGTTTCCCTGACCAGAGACCATCCCCATCGCTTTCTGATGCAGCACTAAGGAGCATTGGCCGAAACAACATTTCAAATCAAGCAGCAGCTAGCATCCCTCTTGGTGCTGGGAACATGGTTTCTAACAATGGAACCCTTGGTTCAGTCCCTTCAGCCTCTGAAATAACTAAGAGGAACATGTTGGCAGCTGATGATAGACTTGGTGGAAGTAGTGGGATGGTGCAGCCTCTTGTATCCCCATTAAGTAATAGCAGATTGATCTTGCCTCAGGTTGGGAAGGCTAATGAAGCTGCCTCAGCTGACTCTAATGTCATTAATGAGGCTGCAGCTGTATCTAGTAGAGTTTTTTCCCCATCTGTGGTTCCTGGCATGCAATGGAGACCTGGAAGTCCATTCCAGAACCAAAGTGATGCGATTCGTCAAAGAACTGAAATAGCTCCAGATCAAAGGGAAAAGTTTTTGCAGAAGTATCAGCAAGTGCAGCAGCAGGGGCACAGCACCCTGCTTACTATGCCTTCTCTTGGAGGAAATCCTAAGCAGTTTTCTGCCCAGCAGCAAAATCCACTTTTGCAACAGTTTAACTCCCAAGGTTCCTCTGTTTCTTCTCAATCTGCTATTGGCCTTGGAGTCCAGTCACCAGGTTTTAGTGGTATTTCAACTACTACACTACAACAGCCACCCAATTCGGTCCATTCCCCATCTAGTCAACAGTCATTGATGTCAGGTGTTTCCAAAGATGCAGATGTTGGCAATTCTAAAATTGAAGATCCACAACATCAGAATTTTCCTGATGATTCAGCTGTTGAATCTACTGGTAGTACTGGGGTTGGCAAGAGTCTCATAAGTGAAGATGATTTGAAATCAACATTTGCTGCAGATTCTCCAGCAGGGGTATCCGTCTCCCTTGCAGAAGCTGGTCAAACATCCAGAGATATTGATTTGTCTCCTGGCCAACCTTTACAACCCAATCAACCTACTGGTAACCTTGGTGTCATTGGGAGAAGAAATGGCACGGATCTTGGAGCCATTGGTGATAGTTTCATGGGATCAAGTTCAAGTATTAATCCAAGTGGAGTGCGTGATCAATTATACAATTTGCAAATGCTTGAGGCAGCACACTACAAACTTCCTCTACCCAGAGACTCAGAACGTCCTAGAGCTTATACTCCTAGGCACCCAACGATAACACCTTCTAGTTATCCTCAGACACAGGCTCCTATTGTTAATAATCCTGCTTTTTGGGAGAGAGTAGGTCTTGAACCATTTGGCACTGATACATTGTTCTATGCATTTTATTATCAACAGAACACTTACCAGCAGTATTTGGCTGCAAAGGAACTAAAGAAACAGTCCTGGAGATACCACAAAAAGTATAACACATGGTTTCAGCGTCATGAAGAGCCCAAAGTTGCTACAGATGAATATGAGCAAGGAACATACGTATATTTCGATTTCCATATTGCAAATGATGACCTTCAACATGGGTGGTGTCAAAGAATCAAAACTGAATTCACTTTTGAATATAATTATCTTGAAGACGAGCTTCTTGTATAG 1626 0.4317 MENANAANSPSANQSSSLKEEEINSFPDQRPSPSLSDAALRSIGRNNISNQAAASIPLGAGNMVSNNGTLGSVPSASEITKRNMLAADDRLGGSSGMVQPLVSPLSNSRLILPQVGKANEAASADSNVINEAAAVSSRVFSPSVVPGMQWRPGSPFQNQSDAIRQRTEIAPDQREKFLQKYQQVQQQGHSTLLTMPSLGGNPKQFSAQQQNPLLQQFNSQGSSVSSQSAIGLGVQSPGFSGISTTTLQQPPNSVHSPSSQQSLMSGVSKDADVGNSKIEDPQHQNFPDDSAVESTGSTGVGKSLISEDDLKSTFAADSPAGVSVSLAEAGQTSRDIDLSPGQPLQPNQPTGNLGVIGRRNGTDLGAIGDSFMGSSSSINPSGVRDQLYNLQMLEAAHYKLPLPRDSERPRAYTPRHPTITPSSYPQTQAPIVNNPAFWERVGLEPFGTDTLFYAFYYQQNTYQQYLAAKELKKQSWRYHKKYNTWFQRHEEPKVATDEYEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELLV* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2265 541 PANTHER CCR4 NOT-RELATED 28 541 IPR040168 GO:0030015
Amo06g2265 541 MobiDBLite consensus disorder prediction 287 302 - -
Amo06g2265 541 MobiDBLite consensus disorder prediction 241 269 - -
Amo06g2265 541 PIRSF NOT_su_3_5 1 541 IPR012270 GO:0006355|GO:0030015
Amo06g2265 541 MobiDBLite consensus disorder prediction 1 42 - -
Amo06g2265 541 Pfam NOT2 / NOT3 / NOT5 family 398 535 IPR007282 GO:0006355
Amo06g2265 541 PANTHER BNAA10G16600D PROTEIN 28 541 - -
Amo06g2265 541 MobiDBLite consensus disorder prediction 241 303 - -
Amo06g2265 541 Gene3D - 381 536 IPR038635 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2265 Amo-Chr6 80444096 80449366 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2265 K12580 - gmx:100785965 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2970 16 129545228 129557994 Amo06g2265 06 80444096 80449366 hybridization