Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2152 ATGCCTGTTACTATAAGCGGTCTTCGGCGATTGACATCATCAAAGCTCCCATATGTTGATCACAATCTTGATGTCATTGTCAACATTGTCAGACATGCCATTCAAAATGCTGCTCCTTTTGAAGAAGCGGCACTACGCTTGAAAGAAACATATGCTGCAAAAATGAAGGAAGCAAGATTGAAAGCAGCACAAGAAGCAAGTGTCGTAGATGCTGCTCCTGTTGAAGATGGAGTAGAAGCTTCTCATCTGCTAGATTTTGAACATACACCCGAAGAAGAAAGTACTGTCATTGATAATTCAACCTGTGTTAATATCTCAGAGACCCTTCCATTTTCTTATGATCTGAAGGAGGATTGCTCTCAGCATGAAGATATGAATGGACAAGTAAAAATTAAATCCAGTTGTCTAACTTTAGAGCTTCCACAGGTAGTAGGAGGGCCTATTGATGCTATTGCTGATGCTCTGTCAGGCGATTCAGCTTCAAGAAATAGGCTTAATCCTAATGAGAAGGTCAAGGAAGAGATCAAGCTAGATCGCATTAGGATGTCAGTCAAGCTGGAGCCAGTTTCCGCTGCTGTGTCGGCTGATACAGTGATGATAGACTCCAGTATAGATTCCGGCTGTATGACTCAGAACAACCTATTAGGCTCTGAATGA 657 0.4201 MPVTISGLRRLTSSKLPYVDHNLDVIVNIVRHAIQNAAPFEEAALRLKETYAAKMKEARLKAAQEASVVDAAPVEDGVEASHLLDFEHTPEEESTVIDNSTCVNISETLPFSYDLKEDCSQHEDMNGQVKIKSSCLTLELPQVVGGPIDAIADALSGDSASRNRLNPNEKVKEEIKLDRIRMSVKLEPVSAAVSADTVMIDSSIDSGCMTQNNLLGSE* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2152 218 PANTHER 3'-5' EXONUCLEASE 1 170 - -
Amo06g2152 218 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 1 170 IPR045092 GO:0000175|GO:0000467
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2152 Amo-Chr6 77692287 77695536 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2152 - K12591 gmx:100804872 103.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2839 16 125989035 125998568 Amo06g2152 06 77692287 77695536 hybridization