Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2012 ATGCAAAGCCAAAATTCTCATCCTCTGCCATCACATGAATTGCTGATTGAAAATTTAAAACATTGGCAGAAAAAGAAGATGGGAAAGGAGGAAATAAACGAGAAGCTTTTGCAAAAGGATTCATCAGTTGGGAAAAGGGTATGGAAAGAGAGCAAGAAGATGTGGGTAGTGGCAGGGCCAGCCATAATGTCAAGGTTCTCAACATTTGGTATAACTGTGGTTAGTCAATCCTTCATTGGTCATATTGGATCCACTGACCTTGCTGCCTATGCACTTGTCATGACTTTACTAGTCAAATTTGCAAATGGTGTTTTGCTAGGTATGGCAAGTGCATTGGAAACTCTATGTGGGCAAGCATATGGAGCCAAAAAATATGAGATGCTTGGAATATATCTCCAAAGATCATGGATAATCTTGTTCATGACCTCACTACTCCTTCTTCCAATTTTCATCTTCACAGCACCACTCTTAAAGTTTCTAGGCCAAGAAAAAACCATTGCTGAGGTGGCAGGAAGCATTTCACTATGGTCAATTCTTGTGGTATTTTCATTCTTAGTTTCATTCACATGCCAAATAGAATTCGCCGTCGACTCCGGACTGCCTTGGCGACACCAGCAAGCAGCAAATCGCCTTGAGATATGGTACAATGCAGTCTTGATCCTTCTAACAGGGAACATGAAAAATGCTGAGGTTTACATTGATGCACTATCCATATGCCTCAACATCAATGGATGGGAAATGGTGATAGCCCTTGGTTTCTTTGCTGCAGCTGGTGTGAGGGTGGCAAATGAACTTGGAAGAGGGAGTTCAGAGGGTGCAAAATTCTCCATTGTAGTGACAGCAGTGACATCATTTTGCATTGGCATTGTGCTATTCTTTGTATTCCTTTTGCTGAGAGAAAGAGTTGCATACGTTTTCACTCCAAATCCAATGGTGGCTGAAGCAGTTGGGGAATTATCACCTTTACTCGCTTTCTCTATCTTCTTGAACAGTCTCCAACCTGTGCTCTCCGGAGTTTCTGTTGGAGCTGGGTGGCAGAGTGTTGTAGCATATGTAAACATAGGTTGCTATTACCTAATTGGTATTCCTGTTGGAGTGCTGCTTGGTAATTTTCTCCATTTGAAAATCAAGGGTATTTGGATCGGAATGCTGTTTGGAACAGTTGTGCAAACGATAATGCTTATTACAATCACAATGAAAACAGATTGGGACAAGCAAGTAGAGATAGCTCGAAATCGTGTTAACAAATGGACTATAATCGAAGAGAACGAAGAACCCTGCAACAGTAGTTAG 1293 0.4153 MQSQNSHPLPSHELLIENLKHWQKKKMGKEEINEKLLQKDSSVGKRVWKESKKMWVVAGPAIMSRFSTFGITVVSQSFIGHIGSTDLAAYALVMTLLVKFANGVLLGMASALETLCGQAYGAKKYEMLGIYLQRSWIILFMTSLLLLPIFIFTAPLLKFLGQEKTIAEVAGSISLWSILVVFSFLVSFTCQIEFAVDSGLPWRHQQAANRLEIWYNAVLILLTGNMKNAEVYIDALSICLNINGWEMVIALGFFAAAGVRVANELGRGSSEGAKFSIVVTAVTSFCIGIVLFFVFLLLRERVAYVFTPNPMVAEAVGELSPLLAFSIFLNSLQPVLSGVSVGAGWQSVVAYVNIGCYYLIGIPVGVLLGNFLHLKIKGIWIGMLFGTVVQTIMLITITMKTDWDKQVEIARNRVNKWTIIEENEEPCNSS* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2012 430 Pfam MatE 209 366 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Amo06g2012 430 Pfam MatE 60 190 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Amo06g2012 430 CDD MATE_eukaryotic 50 408 IPR045069 GO:0042910|GO:1990961
Amo06g2012 430 PANTHER PROTEIN DETOXIFICATION 38 192 - -
Amo06g2012 430 PANTHER PROTEIN DETOXIFICATION 208 418 - -
Amo06g2012 430 PANTHER MULTIDRUG RESISTANCE PROTEIN 38 192 - -
Amo06g2012 430 PANTHER MULTIDRUG RESISTANCE PROTEIN 208 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2012 Amo-Chr6 73075992 73090675 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2012 K03327 - csin:114292872 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2722 16 120483079 120487471 Amo06g2012 06 73075992 73090675 hybridization