Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0462 ATGGCGCCCAGTCGCAAGAAGGGCGCCAGGAAGGCGGCGGCGGCTGCCGCCGCACGTCGGCAGTGGAAGGTCGGAGATCTCGTGCTTGCTAAGGTTAAGGGCTTCCCTGCCTGGCCCGCCACGGTAAGTGAGCCGGAGAAGTGGGGTTATTCCTCTGATGGGAAGAAAGTACTTGTTTACTTCTTTGGAACCCAACAAATAGCATTCTGCAATCCTGCTGATGTTGAAGCCTTTACTGAAGAGAAGAAACAGTCTCTTGCCAAACGACAGGGAAGGGGTGCTGATTTTGTGCGTGCAGTAAAGGAGATTATTGCCAGTTATGAAAAGTTAAAGCGAGACATCCAAGTTCAGAAAACTTGCTCCAATGATCAAGTTACTAATGTAGATGTCTCAAAGCCAGCTGACTCGTATGCTAARGTAAAGGTTCAAAGAGATGCTCCTTTGACACATGATTCACAAAATAAATCTTCAAATTTGACTGACAGACAAGAGRTAGTTTGTGCAGCTGAGAATGGTCCAGTAGTTGCAATTAGGGGTGAATCCTGTAATAATGAGGTATCATTGGAAGAACCTACTGATGATGCTGTTGCAACTGCAACTGGGAACTCACCTTTGCCAGTAACTTCCCCATCTCCAGGAAGATGCAAAGACTTGCATCTGGAAYGCCATGTACTACAAAGAAATGAGCCTGTTCGAAGATCTAGAAGCTCATCACGAGTCCACAACASTGTTGTGCCTTGTGATGCTGGAGGTAATGCTGGTGASGTAACTCATATTGTGCCTATAACWAGGAACAAACGYATTAAAAAATCACCTGATCTCTCTGGGTGTGATGATGCTGATTCTTCAGCATATGCCTCCGATGTCAGCATGGAGGACAATGGTTCTGAAAATATTGCTGTTGATTCTGATTCCTTTAGCCCAAATGAGGGAAGTACACTAGATTCYGATTTTAAACTTGGACAGTCTGAGAATAGTGAGTGGCCTGAATTTGAAGTTGAGTTGAAGAAAGGGCTTGATCTAGAAATTAAGGCTGTATTCAATAAGAAGAAAAGAAAACCAAATAGGAAGAGGGCAAATAATGATTCTGCCACGCCATCCATCAGGAAAGAGGAGCCTGAATCTCAAAATGCCAATCACAGTTTGCAGAATATGTGTGGAAATTCAATTGAGAAATGCTTAAATCAAGACGGAGATGAACACTTGCCCCTATCAAAACGAGCCAGAGTTAGAATGGGCAAATCATCCAGTGAGGCAGAGCTCAATAGCACTGTGCAAGCTCAAGAGAAAAGCTATAAGGAAGACATTGTTAACTCACCAAAGCAGATAATCACATCCTCAAATTGTGAAAATGGTAGCCTGGCTGGTGAGGATCCGGTAGCATTYAATGGAACAGTGGTTCTCGTTTCTTCTTCAAATTTGTTAGAGCCACATTTTGAAAGTGGATCTCAGATTTGTAAAACAAAAAAAGAGAAAATGTTTGGCTGCACAATGGATGTTGAAGCTGCTTTACCTCCATCTAAGCGCCTCCATCGTGCTTTAGAAGCTATGTCTGCTAATGCTGCTGTAGAAGATCAAGCTTGCAACGAGCCATTGTCATCCTTATTGACATCGAGTGGAACTTCCACAAAGAGATGCCCTTGCATGACCACAAATTGCAGTAAAGGAGGTACTGATTTAGAAACGCAAGGCTTGGAATCGTGTGRCATTGGTTGTTCTCACATCAGTGTATCTAGTATCACCACCTGTTCAAATGCAATGATTTCAACAGAGAATAAGTCATCTTCTGAAGTGGATAAGCAGTTGAGCAAGTATCAATGCCATGAAGCTTGCAAAGATGTTGTCCRAGATGGTGTGGATCAAGTTGGTGAAAATCTTGGTGATTCTGTGGTCGATCAGGGTGCTAAAACAGATTCACAAATTCAGTTACATGGAAACATGTCTCCCAATCTTGATGTYAAYTGTTGTGAAGTTAGAAGCAATCAAGATTCTCCAGGTCCATCATTGCCACCAAAAGATGAAGACAATATGAAAACTGTGAATCATTCAAATCCATCTGATACATTAGAACTTAATGGAATAAGTGTTGATCCTGTGGCAGGTCCCGATGAAAGTGGTAAAGTGATACCTCAAAGTAGCATTAATGTGGGTGAGAACAAGGTTGTTTGTGAGGATACACAATGCTCAAAGCAAGCCATTGATGAAGGCAGCAGAATTAAAAACATGCACGAGGCTGTGAGAGGGGTAGAAATCAAGGGACAAGAGGAGTATATGAATTTGACCTCGATATCCAATGGTTGTTTGGGTGAAAATGGTACTTTGTGCATTCAGTCAAGCCCGTCCTTGACTGGTGGTGGAGGCTGCGTTCCTCAAGGATCACCTCCAAATACATCAGTTTGCAATGTTTCTACATCGGACAGTAGTAATATTCTACAAAATGGAAGTTGTAGCCCTGACGTACACCAGAAGAACACTTCATCTGGTCCCATTGATGGATGGAAAGATGGGTCTGTAGCAAATCAACAATCAAGATTGACAGGCAAGTCAACTGATGCAGGGAATGCTGCTTTGTTGTACTTTGAAGCAATGCTTGGAACATTGACAAGGACAAAGGAAAGTATTGGGCGGGCAACCCGAATAGCTATGGACTGTGCAAAGTTTGGCATTGCTGCTAAGGTGATGGAAATTCTTGTCCGAAGTCTGGAAACTGAGTCAAGCCTGCATCGGAAGGTGGACCTATTTTTCCTTGTTGATTCTATTGCTCAAAGTTCTCGTGGTTTGAAAGGTGATGGTGGAGCATATCCATCCGCTATGCAAGCTGTCCTCTCACGCCTATTGTCTGCTGCTGCTCCTCCTGGACATACTTCGCAAGAGAATCGCAGGCAGTGTCTTAAGGTTTTAAGGCTGTGGTTGGAGAGAAGAATCCTTCCAGAATCCATTATTCGTCGTCATATCCGGGAACTGGACACCTATCATAGTTCAGCAGGTGTTTATTCACGACGTACGTTACGGACAGAGAGGCCTTTAGATGACCCTGTTAGAGAAATGGAGGGTATGCTTGTTGACGAATATGGAAGCAACTCAAGTTTTCAGCTTCCTGGATTTTGCATGCCTCAAATGCTTAAAGATGAAGATGAAGAAGGGAGRGATTCTGATGGAGGGAACTTTGAGGCTGTCACTCCCGAGCATGATTCTGAAGTACATGAAGTGCCAGAAATTGCTCATGCAATTGAAAAACACAGACGTGTGTTGGAAGACGTTGATGGTGAGCTTGAAATGGAAGATGTGGCTCCCTCTTTTGATGTTGAATCAAATTCAAATTGCAATGTGGAGGGAGGAGATGGGGATGCCTCACAGTTGAAAAAGAATGTCCAACCATCCTTTGTTCCTCCTCTTCCACAGGAGGTTCCTCTTTCTTCGCCACCTCTACCACCATCCTCTTCACCTCCACCACCACCACCTTCTATGCTACCTCCACCACCACCACCACCGCCACCTTCTCTGCTACCTCCTCCTCCTCCTCCTCCACCACCACCACCTCCCCCACCTTCTCCGCTTCCTCCCCCACCTCCTCCGCCTCCACCTCCACCTCCTCCACCTCCACCTCCACCTCCACCTCTTACTCCTACATTACACTTGATGTCAGCTAGTACCACTGGTCCGTATCATGCTGCAGTTGATGCAAAAAAATTTGTAGATTCACAGATTGTGAGAGACAACATGCACCACTCTATGGCTGAACCCATGACTGCACCCAGAAGTAGCCAACCTATCAATGATGCAGTGTGCTATCAAGACCCAGAACAAAGAGGCATGCATATGACYGTACCGGAGCCTTCATGTTCTTTCAAGACATCCATGGCSCAGCCACAACACAGTTTCCGGTATTCTGATGGTGCTACCCTGCAACACAATGGCTATCCATTACGACCACCTCAACCTGTGCCATCTGATCAGTTTTCTTTCGTTCACGGGGAACAATTGAAACCTCCTCGGGATGGTCCACCACCACCACCACCACCTTTCCACTCCKATAGGCATCACTTTGTGCAGAACATGCAAAGAGAGAACTTCTCCAGCAATCACGATAGATCAAAACCACCTCCATATGARTATCAAGAGAGATGGAATCCTCCCATGCCTTATTCTGGTCCTCAGTATCATGACAATGGTATGCATGTACCTTATGGTTGCCACCCGTGTGAATCTACTAGTTTACCAGGTCAGGGATGGAGGTTTCCTTCCCAGTCAATGAATCACTGGGATTCCATGCCTTACAGACCACCCTATGAAGATGCAGTTCCAGTAGCTAACCGAGGCCCAAGCTATTGGCGACCGAGATGA 4344 0.4491 MAPSRKKGARKAAAAAAARRQWKVGDLVLAKVKGFPAWPATVSEPEKWGYSSDGKKVLVYFFGTQQIAFCNPADVEAFTEEKKQSLAKRQGRGADFVRAVKEIIASYEKLKRDIQVQKTCSNDQVTNVDVSKPADSYAKVKVQRDAPLTHDSQNKSSNLTDRQEXVCAAENGPVVAIRGESCNNEVSLEEPTDDAVATATGNSPLPVTSPSPGRCKDLHLEXHVLQRNEPVRRSRSSSRVHNXVVPCDAGGNAGXVTHIVPITRNKRIKKSPDLSGCDDADSSAYASDVSMEDNGSENIAVDSDSFSPNEGSTLDSDFKLGQSENSEWPEFEVELKKGLDLEIKAVFNKKKRKPNRKRANNDSATPSIRKEEPESQNANHSLQNMCGNSIEKCLNQDGDEHLPLSKRARVRMGKSSSEAELNSTVQAQEKSYKEDIVNSPKQIITSSNCENGSLAGEDPVAFNGTVVLVSSSNLLEPHFESGSQICKTKKEKMFGCTMDVEAALPPSKRLHRALEAMSANAAVEDQACNEPLSSLLTSSGTSTKRCPCMTTNCSKGGTDLETQGLESCXIGCSHISVSSITTCSNAMISTENKSSSEVDKQLSKYQCHEACKDVVXDGVDQVGENLGDSVVDQGAKTDSQIQLHGNMSPNLDVNCCEVRSNQDSPGPSLPPKDEDNMKTVNHSNPSDTLELNGISVDPVAGPDESGKVIPQSSINVGENKVVCEDTQCSKQAIDEGSRIKNMHEAVRGVEIKGQEEYMNLTSISNGCLGENGTLCIQSSPSLTGGGGCVPQGSPPNTSVCNVSTSDSSNILQNGSCSPDVHQKNTSSGPIDGWKDGSVANQQSRLTGKSTDAGNAALLYFEAMLGTLTRTKESIGRATRIAMDCAKFGIAAKVMEILVRSLETESSLHRKVDLFFLVDSIAQSSRGLKGDGGAYPSAMQAVLSRLLSAAAPPGHTSQENRRQCLKVLRLWLERRILPESIIRRHIRELDTYHSSAGVYSRRTLRTERPLDDPVREMEGMLVDEYGSNSSFQLPGFCMPQMLKDEDEEGRDSDGGNFEAVTPEHDSEVHEVPEIAHAIEKHRRVLEDVDGELEMEDVAPSFDVESNSNCNVEGGDGDASQLKKNVQPSFVPPLPQEVPLSSPPLPPSSSPPPPPPSMLPPPPPPPPPSLLPPPPPPPPPPPPPPSPLPPPPPPPPPPPPPPPPPPPPLTPTLHLMSASTTGPYHAAVDAKKFVDSQIVRDNMHHSMAEPMTAPRSSQPINDAVCYQDPEQRGMHMTVPEPSCSFKTSMAQPQHSFRYSDGATLQHNGYPLRPPQPVPSDQFSFVHGEQLKPPRDGPPPPPPPFHSXRHHFVQNMQRENFSSNHDRSKPPPYEYQERWNPPMPYSGPQYHDNGMHVPYGCHPCESTSLPGQGWRFPSQSMNHWDSMPYRPPYEDAVPVANRGPSYWRPR* 1448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0462 1447 MobiDBLite consensus disorder prediction 1130 1210 - -
Amo06g0462 1447 MobiDBLite consensus disorder prediction 190 216 - -
Amo06g0462 1447 CDD HDGF_related 21 103 IPR035496 -
Amo06g0462 1447 MobiDBLite consensus disorder prediction 811 837 - -
Amo06g0462 1447 MobiDBLite consensus disorder prediction 269 321 - -
Amo06g0462 1447 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1447 - -
Amo06g0462 1447 MobiDBLite consensus disorder prediction 287 321 - -
Amo06g0462 1447 PRINTS Proline rich extensin signature 1176 1192 - -
Amo06g0462 1447 PRINTS Proline rich extensin signature 1142 1154 - -
Amo06g0462 1447 PRINTS Proline rich extensin signature 1154 1175 - -
Amo06g0462 1447 MobiDBLite consensus disorder prediction 657 710 - -
Amo06g0462 1447 Pfam CID domain 860 982 IPR006569 -
Amo06g0462 1447 Gene3D - 858 995 IPR008942 -
Amo06g0462 1447 MobiDBLite consensus disorder prediction 1330 1344 - -
Amo06g0462 1447 MobiDBLite consensus disorder prediction 351 382 - -
Amo06g0462 1447 MobiDBLite consensus disorder prediction 1271 1383 - -
Amo06g0462 1447 SMART 558neu5 859 989 IPR006569 -
Amo06g0462 1447 ProSiteProfiles CID domain profile. 852 992 IPR006569 -
Amo06g0462 1447 SUPERFAMILY Tudor/PWWP/MBT 19 120 - -
Amo06g0462 1447 MobiDBLite consensus disorder prediction 1041 1062 - -
Amo06g0462 1447 SMART PWWP_4 22 79 IPR000313 -
Amo06g0462 1447 Pfam PWWP domain 25 107 IPR000313 -
Amo06g0462 1447 MobiDBLite consensus disorder prediction 141 161 - -
Amo06g0462 1447 PANTHER PWWP DOMAIN PROTEIN 1 1447 - -
Amo06g0462 1447 MobiDBLite consensus disorder prediction 147 161 - -
Amo06g0462 1447 MobiDBLite consensus disorder prediction 1086 1222 - -
Amo06g0462 1447 ProSiteProfiles PWWP domain profile. 24 81 IPR000313 -
Amo06g0462 1447 Gene3D - 3 107 - -
Amo06g0462 1447 MobiDBLite consensus disorder prediction 1426 1447 - -
Amo06g0462 1447 MobiDBLite consensus disorder prediction 1279 1300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0462 Amo-Chr6 6420431 6429414 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0462 - - ahf:112805343 2162.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0027 16 484244 493227 Amo06g0462 06 6420431 6429414 hybridization