Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0326 ATGGCTGAAGATAATTCATCAAACTCCAACAACCTTAGAATCACCATTGAAAGAAACCCTTCACAGTCACGCCTCTCTGAACTCAACATCAAGTGTTGGCCCAAATGGGGTTGTTCTCCTGGGAAGTACCAGTTGAAATTTGATGCAGAAGAGACATGCTATTTGCTGAAAGGGAAAGTGAAGGCATACCCAAAAGGTTCATCAGATTTTGTTGAGTTTGGTGCTGGTGACCTTGTTACAATTCCAAAGGGACTTAGTTGCACTTGGGATGTTTCTGTTGCAGTTGATAAGTACTACAAGTTTGAATCTGAATCTTCTTCTTCTTCTTCTTCATGA 336 0.4077 MAEDNSSNSNNLRITIERNPSQSRLSELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYPKGSSDFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESESSSSSSS* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0326 111 PANTHER OS04G0445200 PROTEIN 4 108 - -
Amo06g0326 111 Gene3D Jelly Rolls 2 101 IPR014710 -
Amo06g0326 111 PANTHER RMLC-LIKE JELLY ROLL PROTEIN-RELATED 4 108 - -
Amo06g0326 111 SUPERFAMILY RmlC-like cupins 21 99 IPR011051 -
Amo06g0326 111 Pfam EutQ-like cupin domain 26 99 IPR008579 -
Amo06g0326 111 CDD cupin_TM1112-like 33 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0326 Amo-Chr6 4709911 4710785 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0326 - - gmx:100793722 194.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1553 16 28794019 28795052 Amo06g0326 06 4709911 4710785 hybridization
Amo06g0326 06 4709911 4710785 Amo12g0916 12 20554253 20555156 PCT
Amo12g0916 12 20554253 20555156 Amo06g0326 06 4709911 4710785 PCT