Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0297 ATGGCTGCTGCTACGGCAGAAGAGAAAGCTCCTGCTAGATTGGAAGAGGATTATACTCAAGATGGCACAGTGGATCTCAAAGGTAGACCCGTTTTAAGATCAAAGACTGGGAAATGGAAAGCTTGCTCCTTCATAGTAGGGGGAATGGTGTATTATTCCCAACAATACTATGGAATAGCATCAAACCTAGTACAATATCTGACAGAGAAGTTGCATGAAGGCATTGTGAATTCTTCAAACAACGTTAGTAACTGGGTGGGTTCTGTGTGGATGACGCCACTGGCAGGGGCTTACATAGCTGATGCCTACCTTGGACGATATTGGACCTTTGTTATTGCATCAGCAATCTATCTTCTGGGCATGGTTTTGATAACTCTAGCAGTGTCAGTACGGGCACTGAGGCCACCGCCATGTCCAGTGGGTGTAGACGACGCCAATTGCCCACGCGCCACCAAATTGCAACTGGACATATTCTTCTTGGCTCTGTACACTATTGCAGTTGGCACAGGTGGCACAAACCCAAAGAGAGGCACCACAAGCTCTCTTTCTTCAATTGGTGGATGTTTAGCATCTTCTTTGGTACCCTTTTCTCCAACACTTTCTTGGTCTACATTCAAGAGAAAGTCAGTTGGACCATTGGGTATGGGCTTCCAACTATCGGGCTTGCAGCACAAGTTACCTTCTGGGAGCCCTATAACTAGGATTCTTCAGGTATATGTTGCAGCATTCAGGAAGTGGAAGGTGCATATTCCTGGAGATCCAAAAGAGTTGCATGAACTAAGCATTGAGGAGTATGTCAGTAATGGGAGAACCAGAATTGATCATAGCCCTTCATTCAGTTTTCTAGACAAGGCGGCAACGAGGACAGACCAAACTTCACCGTGGATGCTTTGTACAGTGACACAAGTTGAGGAGACAAAGCAAATGACCAAAATGGTCCCTATTTTGATCACAACTCTTCTACCAAGCACCATGCTAATTCAAGCAACCACACTCTTCATAAAACAAGGCAACACCCTAAACAGGAGTATGGGACCAGATTTTGATATCCCCCCAGCTTGTCTCACATCATTCATAACCATCTTCATGCTCATTAGCATTGTTATCTATGATCGTGTATTTGTTCCCGTGATCCGGCGATATACCAAGAATCCCAGAGGGATTACACTTCTTCAGAGACTCGGAATTGGCCTCGTGATTCACATCATTGTGTTGATCACTGCGAGTTTTGTTGAGAGGAAGAGACTCAGCGTTGCAAGAGAACATAACCTCTTGCGCCAGCATGACCAACTTCCTCTCACTATTTTCATCTTGCTTCCTCAGTTTGCGCTGACGGGGATTGCTGATAACTTTGTTGAAGTTGCGAAGCTGGAGTTCTTCTATGATCAAGCACCTGAAGGCATGAAGAGTATGGGAACATCATACTTCACCACCAGCTTGGGAATTGGAAGCTTTCTTGCTACTTTCCTTCTAACAACGGTTGCTAATCTCACCAAGAGAAATGGTCACAAGGGTTGGGTATTGAATAACCTGAACGTTTCACATTTGGATTATTATTATGCATTCATGGCAGGGCTGAGTTTTATCAACTTGCTTTGCTTTCTGGTTGTTGCCAAGTTCTTTGTATATAATGATGATGTAGCACAAAAGAAAACAGGCTTGGAGATGAACACTGCTTCATCTCAAGGCTATAGTAATAATAGAATTAGCCAAAACACCCCACATCAAGATCACAATTAG 1740 0.4402 MAAATAEEKAPARLEEDYTQDGTVDLKGRPVLRSKTGKWKACSFIVGGMVYYSQQYYGIASNLVQYLTEKLHEGIVNSSNNVSNWVGSVWMTPLAGAYIADAYLGRYWTFVIASAIYLLGMVLITLAVSVRALRPPPCPVGVDDANCPRATKLQLDIFFLALYTIAVGTGGTNPKRGTTSSLSSIGGCLASSLVPFSPTLSWSTFKRKSVGPLGMGFQLSGLQHKLPSGSPITRILQVYVAAFRKWKVHIPGDPKELHELSIEEYVSNGRTRIDHSPSFSFLDKAATRTDQTSPWMLCTVTQVEETKQMTKMVPILITTLLPSTMLIQATTLFIKQGNTLNRSMGPDFDIPPACLTSFITIFMLISIVIYDRVFVPVIRRYTKNPRGITLLQRLGIGLVIHIIVLITASFVERKRLSVAREHNLLRQHDQLPLTIFILLPQFALTGIADNFVEVAKLEFFYDQAPEGMKSMGTSYFTTSLGIGSFLATFLLTTVANLTKRNGHKGWVLNNLNVSHLDYYYAFMAGLSFINLLCFLVVAKFFVYNDDVAQKKTGLEMNTASSQGYSNNRISQNTPHQDHN* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0297 579 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 21 178 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo06g0297 579 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 223 554 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo06g0297 579 Gene3D MFS general substrate transporter like domains 11 179 IPR036259 -
Amo06g0297 579 MobiDBLite consensus disorder prediction 558 573 - -
Amo06g0297 579 MobiDBLite consensus disorder prediction 558 579 - -
Amo06g0297 579 SUPERFAMILY MFS general substrate transporter 347 539 IPR036259 -
Amo06g0297 579 Pfam POT family 223 507 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo06g0297 579 Pfam POT family 107 173 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo06g0297 579 Gene3D MFS general substrate transporter like domains 200 550 IPR036259 -
Amo06g0297 579 PANTHER PROTEIN NRT1/ PTR FAMILY 5.2-LIKE 223 554 - -
Amo06g0297 579 PANTHER PROTEIN NRT1/ PTR FAMILY 5.2-LIKE 21 178 - -
Amo06g0297 579 SUPERFAMILY MFS general substrate transporter 39 206 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0297 Amo-Chr6 4374529 4380444 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0297 16 549 Organic Solute Cotransporters AT5G46040 50.087 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0297 - - gmx:100807002 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g0297 06 4374529 4380444 Amo02g1417 02 34636046 34649753 PCT