Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1417 ATGAGTGTTAATATGGAAGAGGGTAGAGTAGTGATGAGTAGTAGTAGTGAGTATACACAAGATGGTAGTGTAGATCTTAAAGGAAACCCTGTTCTCAAATCCAAAAGGGGTCGCTGGAAAGCTTGCTCTTTTGTTGTCGTATACGAGATATTCGAAAGGATGGCATATTATGGAATATCATCAAATCTGATATTGTATCTGACAAAGAAGCTTCATCAAGGAACTGTTACAGCTTCGAATAATGTAACAAACTGGGTTGGCACCATTTGGATTACTCCCATATTTGGTGCCTACATTGCCGATGCTCATCTTGGTCGCTATTGGACCTTTCTCGTTGCCTCTATCATCTATCTCTTGGGTATGTCTCTACTGACATTGTCAGTTTCCCTTCCAAGCCTAAAACCACCTCAATGCCATGAAGCTGATGTAACAAAGTGCGAAAAGGCCTCAACACTTCACCTAGCTGTATTCTATGGTGCACTTTACACTCTAGCATTGGGAACAGGTGGGACCAAACCCAACATTTCCACCATAGGTGCTGACCAATTTGATGACTTTGACCCAAAAGAAAAGAGCCACAAACTCTCCTTCTTCAATTGGTGGATGTTCAGCATCTTCATTGGGACCCTCTTTGCAAACACTGTCCTTGTGTATATACAAGATAACGTAGGGTGGACTTTAGGGTATGGTCTTCCAACTCTTGGCCTTGCATTATCAATTATGATATTTTTTGCAGGGACACCCTTCTATAGACACAAATTGCCTTCAGGGAGTCCCTTCACTAGAATGGCCAAGGTCATTGTGGCTTCTATAAGGAAATGGAATGTCATTGTTCCTAGTGACCCTAAAGACCTATATGAGCTTGATTTAGAAGAGTATGCAAAGAATGCGAAAGTCAGAATTGACTCAACTCCAACATTGAGGTTCCTGAACAAAGCATGTGTGAATACTGGTTCAAGTCATAATGCATGGATGCTATGCCCTGTTACACAAGTGGAGGAGACAAAACAAATGCTTAGAATGATCCCAATCTTAGTATCCACATTTGTCCCTAGCACAATGGTTGCTCAAATCAACACCCTTTTTGTGAAACAAGGAACAACACTTGATAGAGCCATTGGAAGAAGCTTCAGTATCCCCCCAGCAAGTTTAGGTGCATTTGTGACACTCTCAATGCTCATATGTGTTGTGATCTATGACCGTTTCTTTGTGAAGATTATGCAAAAGTTAACCCACAATCCAAGAGGAATTACCCTTCTTCAAAGAATGGGAATTGGACTGGTAATTCACATTGTGATTATGGTAATTGCATTTTTAACTGAAAGGTATAGGCTTAGTGTTGCAAAAGAACATGGGTTGGTCCAAAATGGAGGACAAGTTCCACTAAGCATATTCATATTGCTACCTCAATTTGTGCTTATGGGAACTGCTGATGCATTTTTAGAGGTTGCAAAGATTGAGTTTTTTTATGATCAAGCACCAGAGAGCATGAAGAGTTTAGGCACTTCTTATTCCATGACATCCTTAGGAATTGGGAATTTCCTTAGCACTTTTGTTCTCTCAACAGTTTCACACATCACCAAGGAACATAGCAGTGAACACAAAGGCTGGATTTTGAACAACTTGAATGCTTCCCATCTTGATTATTATTATGCACTTCTTGCAGTGCTCAACTTCTTGAACTTGATCTTTTTCTTGGTTGTTGTAAAGTTCTATGTCTACAGAGCTGAAGTTTCTGATTCCATAAAACATCTTACCGAAGAATTGAAGGAAAAGAAAGCTGTTGTGTCAAACCAAGTCATACCAAGAGATTAA 1815 0.4 MSVNMEEGRVVMSSSSEYTQDGSVDLKGNPVLKSKRGRWKACSFVVVYEIFERMAYYGISSNLILYLTKKLHQGTVTASNNVTNWVGTIWITPIFGAYIADAHLGRYWTFLVASIIYLLGMSLLTLSVSLPSLKPPQCHEADVTKCEKASTLHLAVFYGALYTLALGTGGTKPNISTIGADQFDDFDPKEKSHKLSFFNWWMFSIFIGTLFANTVLVYIQDNVGWTLGYGLPTLGLALSIMIFFAGTPFYRHKLPSGSPFTRMAKVIVASIRKWNVIVPSDPKDLYELDLEEYAKNAKVRIDSTPTLRFLNKACVNTGSSHNAWMLCPVTQVEETKQMLRMIPILVSTFVPSTMVAQINTLFVKQGTTLDRAIGRSFSIPPASLGAFVTLSMLICVVIYDRFFVKIMQKLTHNPRGITLLQRMGIGLVIHIVIMVIAFLTERYRLSVAKEHGLVQNGGQVPLSIFILLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTSLGIGNFLSTFVLSTVSHITKEHSSEHKGWILNNLNASHLDYYYALLAVLNFLNLIFFLVVVKFYVYRAEVSDSIKHLTEELKEKKAVVSNQVIPRD* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1417 604 Pfam POT family 107 537 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo02g1417 604 CDD MFS_NPF5 39 574 IPR044739 GO:0042937|GO:0042938|GO:0071916
Amo02g1417 604 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 22 584 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo02g1417 604 Coils Coil 575 595 - -
Amo02g1417 604 PANTHER PEPTIDE TRANSPORTER 22 584 - -
Amo02g1417 604 Gene3D MFS general substrate transporter like domains 10 580 IPR036259 -
Amo02g1417 604 SUPERFAMILY MFS general substrate transporter 25 570 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1417 Amo-Chr2 34636046 34649753 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1417 17 581 Organic Solute Cotransporters AT5G46040 69.081 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1417 - - gmx:100813385 978.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g0297 06 4374529 4380444 Amo02g1417 02 34636046 34649753 PCT